Gene : Lsat_1_v5_gn_4_12520 L. sativa V8
Defline:  (1 of 3) PTHR10891//PTHR10891:SF631 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  353
Name:  ? Lsat_1_v5_gn_4_12520 Secondary Identifier:  ? PAC:38929469
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_12520 0.5kb upstream 0.5kb upstream 1387   true Lsat_1_v8_lg_4: 18000957-18002343 Lactuca sativa
Lsat_1_v5_gn_4_12520 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 18000957-18001456 Lactuca sativa
Lsat_1_v5_gn_4_12520 0.5kb downstream 0.5kb downstream 1387   true Lsat_1_v8_lg_4: 18001457-18002843 Lactuca sativa
Lsat_1_v5_gn_4_12520 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 18002344-18002843 Lactuca sativa
Lsat_1_v5_gn_4_12520 1.0kb upstream 1.0kb upstream 1887   true Lsat_1_v8_lg_4: 18000457-18002343 Lactuca sativa
Lsat_1_v5_gn_4_12520 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 18000457-18001456 Lactuca sativa
Lsat_1_v5_gn_4_12520 1.0kb downstream 1.0kb downstream 1887   true Lsat_1_v8_lg_4: 18001457-18003343 Lactuca sativa
Lsat_1_v5_gn_4_12520 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 18002344-18003343 Lactuca sativa
Lsat_1_v5_gn_4_12520 2.0kb upstream 2.0kb upstream 2887   true Lsat_1_v8_lg_4: 17999457-18002343 Lactuca sativa
Lsat_1_v5_gn_4_12520 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 17999457-18001456 Lactuca sativa
Lsat_1_v5_gn_4_12520 2.0kb downstream 2.0kb downstream 2887   true Lsat_1_v8_lg_4: 18001457-18004343 Lactuca sativa
Lsat_1_v5_gn_4_12520 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 18002344-18004343 Lactuca sativa
Lsat_1_v5_gn_4_12520 5.0kb upstream 5.0kb upstream 5887   true Lsat_1_v8_lg_4: 17996457-18002343 Lactuca sativa
Lsat_1_v5_gn_4_12520 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 17996457-18001456 Lactuca sativa
Lsat_1_v5_gn_4_12520 5.0kb downstream 5.0kb downstream 5887   true Lsat_1_v8_lg_4: 18001457-18007343 Lactuca sativa
Lsat_1_v5_gn_4_12520 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 18002344-18007343 Lactuca sativa
Lsat_1_v5_gn_4_12520 10.0kb upstream 10.0kb upstream 10887   true Lsat_1_v8_lg_4: 17991457-18002343 Lactuca sativa
Lsat_1_v5_gn_4_12520 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 17991457-18001456 Lactuca sativa
Lsat_1_v5_gn_4_12520 10.0kb downstream 10.0kb downstream 10887   true Lsat_1_v8_lg_4: 18001457-18012343 Lactuca sativa
Lsat_1_v5_gn_4_12520 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 18002344-18012343 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475656 5263 Asterids View MSA
123736874 5271 Pentapetalae View MSA
122791196 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain