Gene : Lsat_1_v5_gn_4_12481 L. sativa V8
Defline:  (1 of 1) KOG3369 - Transport protein particle (TRAPP) complex subunit Genomic Order:  332
Name:  ? Lsat_1_v5_gn_4_12481 Secondary Identifier:  ? PAC:38934190
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_12481 0.5kb upstream 0.5kb upstream 1970   true Lsat_1_v8_lg_4: 17506389-17508358 Lactuca sativa
Lsat_1_v5_gn_4_12481 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 17506389-17506888 Lactuca sativa
Lsat_1_v5_gn_4_12481 0.5kb downstream 0.5kb downstream 1970   true Lsat_1_v8_lg_4: 17506889-17508858 Lactuca sativa
Lsat_1_v5_gn_4_12481 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 17508359-17508858 Lactuca sativa
Lsat_1_v5_gn_4_12481 1.0kb upstream 1.0kb upstream 2470   true Lsat_1_v8_lg_4: 17505889-17508358 Lactuca sativa
Lsat_1_v5_gn_4_12481 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 17505889-17506888 Lactuca sativa
Lsat_1_v5_gn_4_12481 1.0kb downstream 1.0kb downstream 2470   true Lsat_1_v8_lg_4: 17506889-17509358 Lactuca sativa
Lsat_1_v5_gn_4_12481 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 17508359-17509358 Lactuca sativa
Lsat_1_v5_gn_4_12481 2.0kb upstream 2.0kb upstream 3470   true Lsat_1_v8_lg_4: 17504889-17508358 Lactuca sativa
Lsat_1_v5_gn_4_12481 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 17504889-17506888 Lactuca sativa
Lsat_1_v5_gn_4_12481 2.0kb downstream 2.0kb downstream 3470   true Lsat_1_v8_lg_4: 17506889-17510358 Lactuca sativa
Lsat_1_v5_gn_4_12481 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 17508359-17510358 Lactuca sativa
Lsat_1_v5_gn_4_12481 5.0kb upstream 5.0kb upstream 6470   true Lsat_1_v8_lg_4: 17501889-17508358 Lactuca sativa
Lsat_1_v5_gn_4_12481 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 17501889-17506888 Lactuca sativa
Lsat_1_v5_gn_4_12481 5.0kb downstream 5.0kb downstream 6470   true Lsat_1_v8_lg_4: 17506889-17513358 Lactuca sativa
Lsat_1_v5_gn_4_12481 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 17508359-17513358 Lactuca sativa
Lsat_1_v5_gn_4_12481 10.0kb upstream 10.0kb upstream 11470   true Lsat_1_v8_lg_4: 17496889-17508358 Lactuca sativa
Lsat_1_v5_gn_4_12481 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 17496889-17506888 Lactuca sativa
Lsat_1_v5_gn_4_12481 10.0kb downstream 10.0kb downstream 11470   true Lsat_1_v8_lg_4: 17506889-17518358 Lactuca sativa
Lsat_1_v5_gn_4_12481 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 17508359-17518358 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475266 5263 Asterids View MSA
123740967 5271 Pentapetalae View MSA
122786625 5272 Eudicot View MSA
122043161 5273 Angiosperm View MSA
121347078 5274 Embryophyte View MSA
123424121 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain