Gene : Lsat_1_v5_gn_4_125741 L. sativa V8
Defline:  (1 of 2) PTHR33676//PTHR33676:SF3 - FAMILY NOT NAMED // COLD REGULATED PROTEIN 27 Genomic Order:  3582
Name:  ? Lsat_1_v5_gn_4_125741 Secondary Identifier:  ? PAC:38932319
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_125741 0.5kb upstream 0.5kb upstream 2774   true Lsat_1_v8_lg_4: 229659395-229662168 Lactuca sativa
Lsat_1_v5_gn_4_125741 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 229659395-229659894 Lactuca sativa
Lsat_1_v5_gn_4_125741 0.5kb downstream 0.5kb downstream 2774   true Lsat_1_v8_lg_4: 229659895-229662668 Lactuca sativa
Lsat_1_v5_gn_4_125741 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 229662169-229662668 Lactuca sativa
Lsat_1_v5_gn_4_125741 1.0kb upstream 1.0kb upstream 3274   true Lsat_1_v8_lg_4: 229658895-229662168 Lactuca sativa
Lsat_1_v5_gn_4_125741 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 229658895-229659894 Lactuca sativa
Lsat_1_v5_gn_4_125741 1.0kb downstream 1.0kb downstream 3274   true Lsat_1_v8_lg_4: 229659895-229663168 Lactuca sativa
Lsat_1_v5_gn_4_125741 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 229662169-229663168 Lactuca sativa
Lsat_1_v5_gn_4_125741 2.0kb upstream 2.0kb upstream 4274   true Lsat_1_v8_lg_4: 229657895-229662168 Lactuca sativa
Lsat_1_v5_gn_4_125741 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 229657895-229659894 Lactuca sativa
Lsat_1_v5_gn_4_125741 2.0kb downstream 2.0kb downstream 4274   true Lsat_1_v8_lg_4: 229659895-229664168 Lactuca sativa
Lsat_1_v5_gn_4_125741 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 229662169-229664168 Lactuca sativa
Lsat_1_v5_gn_4_125741 5.0kb upstream 5.0kb upstream 7274   true Lsat_1_v8_lg_4: 229654895-229662168 Lactuca sativa
Lsat_1_v5_gn_4_125741 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 229654895-229659894 Lactuca sativa
Lsat_1_v5_gn_4_125741 5.0kb downstream 5.0kb downstream 7274   true Lsat_1_v8_lg_4: 229659895-229667168 Lactuca sativa
Lsat_1_v5_gn_4_125741 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 229662169-229667168 Lactuca sativa
Lsat_1_v5_gn_4_125741 10.0kb upstream 10.0kb upstream 12274   true Lsat_1_v8_lg_4: 229649895-229662168 Lactuca sativa
Lsat_1_v5_gn_4_125741 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 229649895-229659894 Lactuca sativa
Lsat_1_v5_gn_4_125741 10.0kb downstream 10.0kb downstream 12274   true Lsat_1_v8_lg_4: 229659895-229672168 Lactuca sativa
Lsat_1_v5_gn_4_125741 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 229662169-229672168 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470063 5263 Asterids View MSA
123751833 5271 Pentapetalae View MSA
122791785 5272 Eudicot View MSA
122049905 5273 Angiosperm View MSA
121311643 5274 Embryophyte View MSA
123348914 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain