Gene : Lsat_1_v5_gn_4_129320 L. sativa V8

Defline:  (1 of 1) 1.5.1.2 - Pyrroline-5-carboxylate reductase / P5CR Genomic Order:  3688
Name:  ? Lsat_1_v5_gn_4_129320 Secondary Identifier:  ? PAC:38934646

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa ARG-PRO-PWY Lactuca sativa pathologic  
Lsativa PROSYN-PWY Lactuca sativa pathologic  
Lsativa PWY-3341 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_129320 0.5kb upstream 0.5kb upstream 2893   true Lsat_1_v8_lg_4: 244192937-244195829 Lactuca sativa
Lsat_1_v5_gn_4_129320 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 244192937-244193436 Lactuca sativa
Lsat_1_v5_gn_4_129320 0.5kb downstream 0.5kb downstream 2893   true Lsat_1_v8_lg_4: 244193437-244196329 Lactuca sativa
Lsat_1_v5_gn_4_129320 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 244195830-244196329 Lactuca sativa
Lsat_1_v5_gn_4_129320 1.0kb upstream 1.0kb upstream 3393   true Lsat_1_v8_lg_4: 244192437-244195829 Lactuca sativa
Lsat_1_v5_gn_4_129320 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 244192437-244193436 Lactuca sativa
Lsat_1_v5_gn_4_129320 1.0kb downstream 1.0kb downstream 3393   true Lsat_1_v8_lg_4: 244193437-244196829 Lactuca sativa
Lsat_1_v5_gn_4_129320 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 244195830-244196829 Lactuca sativa
Lsat_1_v5_gn_4_129320 2.0kb upstream 2.0kb upstream 4393   true Lsat_1_v8_lg_4: 244191437-244195829 Lactuca sativa
Lsat_1_v5_gn_4_129320 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 244191437-244193436 Lactuca sativa
Lsat_1_v5_gn_4_129320 2.0kb downstream 2.0kb downstream 4393   true Lsat_1_v8_lg_4: 244193437-244197829 Lactuca sativa
Lsat_1_v5_gn_4_129320 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 244195830-244197829 Lactuca sativa
Lsat_1_v5_gn_4_129320 5.0kb upstream 5.0kb upstream 7393   true Lsat_1_v8_lg_4: 244188437-244195829 Lactuca sativa
Lsat_1_v5_gn_4_129320 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 244188437-244193436 Lactuca sativa
Lsat_1_v5_gn_4_129320 5.0kb downstream 5.0kb downstream 7393   true Lsat_1_v8_lg_4: 244193437-244200829 Lactuca sativa
Lsat_1_v5_gn_4_129320 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 244195830-244200829 Lactuca sativa
Lsat_1_v5_gn_4_129320 10.0kb upstream 10.0kb upstream 12393   true Lsat_1_v8_lg_4: 244183437-244195829 Lactuca sativa
Lsat_1_v5_gn_4_129320 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 244183437-244193436 Lactuca sativa
Lsat_1_v5_gn_4_129320 10.0kb downstream 10.0kb downstream 12393   true Lsat_1_v8_lg_4: 244193437-244205829 Lactuca sativa
Lsat_1_v5_gn_4_129320 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 244195830-244205829 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467553 5263 Asterids View MSA
123740492 5271 Pentapetalae View MSA
122788937 5272 Eudicot View MSA
122043656 5273 Angiosperm View MSA
123428906 5275 Viridiplantae View MSA
121346927 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain