Gene : Lsat_1_v5_gn_4_128040 L. sativa V8
Defline:  (1 of 6) PF11523 - Protein of unknown function (DUF3223) (DUF3223) Genomic Order:  3637
Name:  ? Lsat_1_v5_gn_4_128040 Secondary Identifier:  ? PAC:38934636
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_128040 0.5kb upstream 0.5kb upstream 5221   true Lsat_1_v8_lg_4: 238087283-238092503 Lactuca sativa
Lsat_1_v5_gn_4_128040 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 238087283-238087782 Lactuca sativa
Lsat_1_v5_gn_4_128040 0.5kb downstream 0.5kb downstream 5221   true Lsat_1_v8_lg_4: 238087783-238093003 Lactuca sativa
Lsat_1_v5_gn_4_128040 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 238092504-238093003 Lactuca sativa
Lsat_1_v5_gn_4_128040 1.0kb upstream 1.0kb upstream 5721   true Lsat_1_v8_lg_4: 238086783-238092503 Lactuca sativa
Lsat_1_v5_gn_4_128040 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 238086783-238087782 Lactuca sativa
Lsat_1_v5_gn_4_128040 1.0kb downstream 1.0kb downstream 5721   true Lsat_1_v8_lg_4: 238087783-238093503 Lactuca sativa
Lsat_1_v5_gn_4_128040 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 238092504-238093503 Lactuca sativa
Lsat_1_v5_gn_4_128040 2.0kb upstream 2.0kb upstream 6721   true Lsat_1_v8_lg_4: 238085783-238092503 Lactuca sativa
Lsat_1_v5_gn_4_128040 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 238085783-238087782 Lactuca sativa
Lsat_1_v5_gn_4_128040 2.0kb downstream 2.0kb downstream 6721   true Lsat_1_v8_lg_4: 238087783-238094503 Lactuca sativa
Lsat_1_v5_gn_4_128040 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 238092504-238094503 Lactuca sativa
Lsat_1_v5_gn_4_128040 5.0kb upstream 5.0kb upstream 9721   true Lsat_1_v8_lg_4: 238082783-238092503 Lactuca sativa
Lsat_1_v5_gn_4_128040 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 238082783-238087782 Lactuca sativa
Lsat_1_v5_gn_4_128040 5.0kb downstream 5.0kb downstream 9721   true Lsat_1_v8_lg_4: 238087783-238097503 Lactuca sativa
Lsat_1_v5_gn_4_128040 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 238092504-238097503 Lactuca sativa
Lsat_1_v5_gn_4_128040 10.0kb upstream 10.0kb upstream 14721   true Lsat_1_v8_lg_4: 238077783-238092503 Lactuca sativa
Lsat_1_v5_gn_4_128040 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 238077783-238087782 Lactuca sativa
Lsat_1_v5_gn_4_128040 10.0kb downstream 10.0kb downstream 14721   true Lsat_1_v8_lg_4: 238087783-238102503 Lactuca sativa
Lsat_1_v5_gn_4_128040 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 238092504-238102503 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467413 5263 Asterids View MSA
123737001 5271 Pentapetalae View MSA
122786246 5272 Eudicot View MSA
122047145 5273 Angiosperm View MSA
121351561 5274 Embryophyte View MSA
123426725 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain