Gene : Lsat_1_v5_gn_4_131941 L. sativa V8
Defline:  (1 of 1) PF15811 - Small VCP/p97-interacting protein (SVIP) Genomic Order:  3763
Name:  ? Lsat_1_v5_gn_4_131941 Secondary Identifier:  ? PAC:38933773
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_131941 0.5kb upstream 0.5kb upstream 2047   true Lsat_1_v8_lg_4: 251070938-251072984 Lactuca sativa
Lsat_1_v5_gn_4_131941 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 251070938-251071437 Lactuca sativa
Lsat_1_v5_gn_4_131941 0.5kb downstream 0.5kb downstream 2047   true Lsat_1_v8_lg_4: 251071438-251073484 Lactuca sativa
Lsat_1_v5_gn_4_131941 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 251072985-251073484 Lactuca sativa
Lsat_1_v5_gn_4_131941 1.0kb upstream 1.0kb upstream 2547   true Lsat_1_v8_lg_4: 251070438-251072984 Lactuca sativa
Lsat_1_v5_gn_4_131941 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 251070438-251071437 Lactuca sativa
Lsat_1_v5_gn_4_131941 1.0kb downstream 1.0kb downstream 2547   true Lsat_1_v8_lg_4: 251071438-251073984 Lactuca sativa
Lsat_1_v5_gn_4_131941 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 251072985-251073984 Lactuca sativa
Lsat_1_v5_gn_4_131941 2.0kb upstream 2.0kb upstream 3547   true Lsat_1_v8_lg_4: 251069438-251072984 Lactuca sativa
Lsat_1_v5_gn_4_131941 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 251069438-251071437 Lactuca sativa
Lsat_1_v5_gn_4_131941 2.0kb downstream 2.0kb downstream 3547   true Lsat_1_v8_lg_4: 251071438-251074984 Lactuca sativa
Lsat_1_v5_gn_4_131941 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 251072985-251074984 Lactuca sativa
Lsat_1_v5_gn_4_131941 5.0kb upstream 5.0kb upstream 6547   true Lsat_1_v8_lg_4: 251066438-251072984 Lactuca sativa
Lsat_1_v5_gn_4_131941 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 251066438-251071437 Lactuca sativa
Lsat_1_v5_gn_4_131941 5.0kb downstream 5.0kb downstream 6547   true Lsat_1_v8_lg_4: 251071438-251077984 Lactuca sativa
Lsat_1_v5_gn_4_131941 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 251072985-251077984 Lactuca sativa
Lsat_1_v5_gn_4_131941 10.0kb upstream 10.0kb upstream 11547   true Lsat_1_v8_lg_4: 251061438-251072984 Lactuca sativa
Lsat_1_v5_gn_4_131941 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 251061438-251071437 Lactuca sativa
Lsat_1_v5_gn_4_131941 10.0kb downstream 10.0kb downstream 11547   true Lsat_1_v8_lg_4: 251071438-251082984 Lactuca sativa
Lsat_1_v5_gn_4_131941 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 251072985-251082984 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466407 5263 Asterids View MSA
123736483 5271 Pentapetalae View MSA
122789828 5272 Eudicot View MSA
122050042 5273 Angiosperm View MSA
121311703 5274 Embryophyte View MSA
123348966 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain