Gene : Lsat_1_v5_gn_4_13360 L. sativa V8
Defline:  (1 of 2) K01835 - phosphoglucomutase (pgm) Genomic Order:  378
Name:  ? Lsat_1_v5_gn_4_13360 Secondary Identifier:  ? PAC:38929643
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa GLUCOSE1PMETAB-PWY Lactuca sativa pathologic  
Lsativa GLYCOGENSYNTH-PWY Lactuca sativa pathologic  
Lsativa PWY-3801 Lactuca sativa pathologic  
Lsativa PWY-5941 Lactuca sativa pathologic  
Lsativa PWY-622 Lactuca sativa pathologic  
Lsativa PWY66-422 Lactuca sativa pathologic  
Lsativa PWY-7238 Lactuca sativa pathologic  
Lsativa PWY-7343 Lactuca sativa pathologic  
Lsativa SUCSYN-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_13360 0.5kb upstream 0.5kb upstream 5794   true Lsat_1_v8_lg_4: 18956268-18962061 Lactuca sativa
Lsat_1_v5_gn_4_13360 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 18961562-18962061 Lactuca sativa
Lsat_1_v5_gn_4_13360 0.5kb downstream 0.5kb downstream 5794   true Lsat_1_v8_lg_4: 18955768-18961561 Lactuca sativa
Lsat_1_v5_gn_4_13360 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 18955768-18956267 Lactuca sativa
Lsat_1_v5_gn_4_13360 1.0kb upstream 1.0kb upstream 6294   true Lsat_1_v8_lg_4: 18956268-18962561 Lactuca sativa
Lsat_1_v5_gn_4_13360 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 18961562-18962561 Lactuca sativa
Lsat_1_v5_gn_4_13360 1.0kb downstream 1.0kb downstream 6294   true Lsat_1_v8_lg_4: 18955268-18961561 Lactuca sativa
Lsat_1_v5_gn_4_13360 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 18955268-18956267 Lactuca sativa
Lsat_1_v5_gn_4_13360 2.0kb upstream 2.0kb upstream 7294   true Lsat_1_v8_lg_4: 18956268-18963561 Lactuca sativa
Lsat_1_v5_gn_4_13360 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 18961562-18963561 Lactuca sativa
Lsat_1_v5_gn_4_13360 2.0kb downstream 2.0kb downstream 7294   true Lsat_1_v8_lg_4: 18954268-18961561 Lactuca sativa
Lsat_1_v5_gn_4_13360 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 18954268-18956267 Lactuca sativa
Lsat_1_v5_gn_4_13360 5.0kb upstream 5.0kb upstream 10294   true Lsat_1_v8_lg_4: 18956268-18966561 Lactuca sativa
Lsat_1_v5_gn_4_13360 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 18961562-18966561 Lactuca sativa
Lsat_1_v5_gn_4_13360 5.0kb downstream 5.0kb downstream 10294   true Lsat_1_v8_lg_4: 18951268-18961561 Lactuca sativa
Lsat_1_v5_gn_4_13360 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 18951268-18956267 Lactuca sativa
Lsat_1_v5_gn_4_13360 10.0kb upstream 10.0kb upstream 15294   true Lsat_1_v8_lg_4: 18956268-18971561 Lactuca sativa
Lsat_1_v5_gn_4_13360 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 18961562-18971561 Lactuca sativa
Lsat_1_v5_gn_4_13360 10.0kb downstream 10.0kb downstream 15294   true Lsat_1_v8_lg_4: 18946268-18961561 Lactuca sativa
Lsat_1_v5_gn_4_13360 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 18946268-18956267 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473423 5263 Asterids View MSA
123740036 5271 Pentapetalae View MSA
122791577 5272 Eudicot View MSA
122046067 5273 Angiosperm View MSA
121346784 5274 Embryophyte View MSA
123426013 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain