Gene : Lsat_1_v5_gn_4_135580 L. sativa V8
Defline:  (1 of 1) PTHR13439:SF4 - PROTEIN K12H6.6, ISOFORM B-RELATED Genomic Order:  3799
Name:  ? Lsat_1_v5_gn_4_135580 Secondary Identifier:  ? PAC:38933763
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_135580 0.5kb upstream 0.5kb upstream 2977   true Lsat_1_v8_lg_4: 254325699-254328675 Lactuca sativa
Lsat_1_v5_gn_4_135580 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 254325699-254326198 Lactuca sativa
Lsat_1_v5_gn_4_135580 0.5kb downstream 0.5kb downstream 2977   true Lsat_1_v8_lg_4: 254326199-254329175 Lactuca sativa
Lsat_1_v5_gn_4_135580 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 254328676-254329175 Lactuca sativa
Lsat_1_v5_gn_4_135580 1.0kb upstream 1.0kb upstream 3477   true Lsat_1_v8_lg_4: 254325199-254328675 Lactuca sativa
Lsat_1_v5_gn_4_135580 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 254325199-254326198 Lactuca sativa
Lsat_1_v5_gn_4_135580 1.0kb downstream 1.0kb downstream 3477   true Lsat_1_v8_lg_4: 254326199-254329675 Lactuca sativa
Lsat_1_v5_gn_4_135580 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 254328676-254329675 Lactuca sativa
Lsat_1_v5_gn_4_135580 2.0kb upstream 2.0kb upstream 4477   true Lsat_1_v8_lg_4: 254324199-254328675 Lactuca sativa
Lsat_1_v5_gn_4_135580 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 254324199-254326198 Lactuca sativa
Lsat_1_v5_gn_4_135580 2.0kb downstream 2.0kb downstream 4477   true Lsat_1_v8_lg_4: 254326199-254330675 Lactuca sativa
Lsat_1_v5_gn_4_135580 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 254328676-254330675 Lactuca sativa
Lsat_1_v5_gn_4_135580 5.0kb upstream 5.0kb upstream 7477   true Lsat_1_v8_lg_4: 254321199-254328675 Lactuca sativa
Lsat_1_v5_gn_4_135580 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 254321199-254326198 Lactuca sativa
Lsat_1_v5_gn_4_135580 5.0kb downstream 5.0kb downstream 7477   true Lsat_1_v8_lg_4: 254326199-254333675 Lactuca sativa
Lsat_1_v5_gn_4_135580 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 254328676-254333675 Lactuca sativa
Lsat_1_v5_gn_4_135580 10.0kb upstream 10.0kb upstream 12477   true Lsat_1_v8_lg_4: 254316199-254328675 Lactuca sativa
Lsat_1_v5_gn_4_135580 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 254316199-254326198 Lactuca sativa
Lsat_1_v5_gn_4_135580 10.0kb downstream 10.0kb downstream 12477   true Lsat_1_v8_lg_4: 254326199-254338675 Lactuca sativa
Lsat_1_v5_gn_4_135580 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 254328676-254338675 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471058 5263 Asterids View MSA
123746967 5271 Pentapetalae View MSA
122786195 5272 Eudicot View MSA
122046296 5273 Angiosperm View MSA
121344008 5274 Embryophyte View MSA
123379957 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain