Gene : Lsat_1_v5_gn_4_139401 L. sativa V8
Defline:  (1 of 2) K00869 - mevalonate kinase (E2.7.1.36, MVK, mvaK1) Genomic Order:  3930
Name:  ? Lsat_1_v5_gn_4_139401 Secondary Identifier:  ? PAC:38933134
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5910 Lactuca sativa pathologic  
Lsativa PWY-922 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_139401 0.5kb upstream 0.5kb upstream 5163   true Lsat_1_v8_lg_4: 270496416-270501578 Lactuca sativa
Lsat_1_v5_gn_4_139401 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 270501079-270501578 Lactuca sativa
Lsat_1_v5_gn_4_139401 0.5kb downstream 0.5kb downstream 5163   true Lsat_1_v8_lg_4: 270495916-270501078 Lactuca sativa
Lsat_1_v5_gn_4_139401 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 270495916-270496415 Lactuca sativa
Lsat_1_v5_gn_4_139401 1.0kb upstream 1.0kb upstream 5663   true Lsat_1_v8_lg_4: 270496416-270502078 Lactuca sativa
Lsat_1_v5_gn_4_139401 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 270501079-270502078 Lactuca sativa
Lsat_1_v5_gn_4_139401 1.0kb downstream 1.0kb downstream 5663   true Lsat_1_v8_lg_4: 270495416-270501078 Lactuca sativa
Lsat_1_v5_gn_4_139401 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 270495416-270496415 Lactuca sativa
Lsat_1_v5_gn_4_139401 2.0kb upstream 2.0kb upstream 6663   true Lsat_1_v8_lg_4: 270496416-270503078 Lactuca sativa
Lsat_1_v5_gn_4_139401 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 270501079-270503078 Lactuca sativa
Lsat_1_v5_gn_4_139401 2.0kb downstream 2.0kb downstream 6663   true Lsat_1_v8_lg_4: 270494416-270501078 Lactuca sativa
Lsat_1_v5_gn_4_139401 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 270494416-270496415 Lactuca sativa
Lsat_1_v5_gn_4_139401 5.0kb upstream 5.0kb upstream 9663   true Lsat_1_v8_lg_4: 270496416-270506078 Lactuca sativa
Lsat_1_v5_gn_4_139401 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 270501079-270506078 Lactuca sativa
Lsat_1_v5_gn_4_139401 5.0kb downstream 5.0kb downstream 9663   true Lsat_1_v8_lg_4: 270491416-270501078 Lactuca sativa
Lsat_1_v5_gn_4_139401 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 270491416-270496415 Lactuca sativa
Lsat_1_v5_gn_4_139401 10.0kb upstream 10.0kb upstream 14663   true Lsat_1_v8_lg_4: 270496416-270511078 Lactuca sativa
Lsat_1_v5_gn_4_139401 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 270501079-270511078 Lactuca sativa
Lsat_1_v5_gn_4_139401 10.0kb downstream 10.0kb downstream 14663   true Lsat_1_v8_lg_4: 270486416-270501078 Lactuca sativa
Lsat_1_v5_gn_4_139401 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 270486416-270496415 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041242 5273 Angiosperm View MSA
121468871 5263 Asterids View MSA
123737750 5271 Pentapetalae View MSA
122787384 5272 Eudicot View MSA
121345229 5274 Embryophyte View MSA
123380177 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain