Gene : Lsat_1_v5_gn_4_138460 L. sativa V8
Defline:  (1 of 2) K10807 - ribonucleoside-diphosphate reductase subunit M1 (RRM1) Genomic Order:  3905
Name:  ? Lsat_1_v5_gn_4_138460 Secondary Identifier:  ? PAC:38933513
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Sequence Feature Displayer

Ontology Annotation Displayer

11 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6126 Lactuca sativa pathologic  
Lsativa PWY-7184 Lactuca sativa pathologic  
Lsativa PWY-7210 Lactuca sativa pathologic  
Lsativa PWY-7211 Lactuca sativa pathologic  
Lsativa PWY-7220 Lactuca sativa pathologic  
Lsativa PWY-7222 Lactuca sativa pathologic  
Lsativa PWY-7226 Lactuca sativa pathologic  
Lsativa PWY-7227 Lactuca sativa pathologic  
Lsativa PWY-7228 Lactuca sativa pathologic  
Lsativa PWY-7229 Lactuca sativa pathologic  
Lsativa PWY-841 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_138460 0.5kb upstream 0.5kb upstream 5788   true Lsat_1_v8_lg_4: 267988552-267994339 Lactuca sativa
Lsat_1_v5_gn_4_138460 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 267988552-267989051 Lactuca sativa
Lsat_1_v5_gn_4_138460 0.5kb downstream 0.5kb downstream 5788   true Lsat_1_v8_lg_4: 267989052-267994839 Lactuca sativa
Lsat_1_v5_gn_4_138460 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 267994340-267994839 Lactuca sativa
Lsat_1_v5_gn_4_138460 1.0kb upstream 1.0kb upstream 6288   true Lsat_1_v8_lg_4: 267988052-267994339 Lactuca sativa
Lsat_1_v5_gn_4_138460 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 267988052-267989051 Lactuca sativa
Lsat_1_v5_gn_4_138460 1.0kb downstream 1.0kb downstream 6288   true Lsat_1_v8_lg_4: 267989052-267995339 Lactuca sativa
Lsat_1_v5_gn_4_138460 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 267994340-267995339 Lactuca sativa
Lsat_1_v5_gn_4_138460 2.0kb upstream 2.0kb upstream 7288   true Lsat_1_v8_lg_4: 267987052-267994339 Lactuca sativa
Lsat_1_v5_gn_4_138460 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 267987052-267989051 Lactuca sativa
Lsat_1_v5_gn_4_138460 2.0kb downstream 2.0kb downstream 7288   true Lsat_1_v8_lg_4: 267989052-267996339 Lactuca sativa
Lsat_1_v5_gn_4_138460 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 267994340-267996339 Lactuca sativa
Lsat_1_v5_gn_4_138460 5.0kb upstream 5.0kb upstream 10288   true Lsat_1_v8_lg_4: 267984052-267994339 Lactuca sativa
Lsat_1_v5_gn_4_138460 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 267984052-267989051 Lactuca sativa
Lsat_1_v5_gn_4_138460 5.0kb downstream 5.0kb downstream 10288   true Lsat_1_v8_lg_4: 267989052-267999339 Lactuca sativa
Lsat_1_v5_gn_4_138460 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 267994340-267999339 Lactuca sativa
Lsat_1_v5_gn_4_138460 10.0kb upstream 10.0kb upstream 15288   true Lsat_1_v8_lg_4: 267979052-267994339 Lactuca sativa
Lsat_1_v5_gn_4_138460 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 267979052-267989051 Lactuca sativa
Lsat_1_v5_gn_4_138460 10.0kb downstream 10.0kb downstream 15288   true Lsat_1_v8_lg_4: 267989052-268004339 Lactuca sativa
Lsat_1_v5_gn_4_138460 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 267994340-268004339 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480540 5263 Asterids View MSA
123747957 5271 Pentapetalae View MSA
122795256 5272 Eudicot View MSA
122044157 5273 Angiosperm View MSA
121347545 5274 Embryophyte View MSA
123424335 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain