Gene : Lsat_1_v5_gn_4_140660 L. sativa V8
Defline:  (1 of 1) K01456 - peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase (E3.5.1.52, NGLY1, PNG1) Genomic Order:  3960
Name:  ? Lsat_1_v5_gn_4_140660 Secondary Identifier:  ? PAC:38932501
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_140660 0.5kb upstream 0.5kb upstream 7081   true Lsat_1_v8_lg_4: 273473303-273480383 Lactuca sativa
Lsat_1_v5_gn_4_140660 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 273473303-273473802 Lactuca sativa
Lsat_1_v5_gn_4_140660 0.5kb downstream 0.5kb downstream 7081   true Lsat_1_v8_lg_4: 273473803-273480883 Lactuca sativa
Lsat_1_v5_gn_4_140660 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 273480384-273480883 Lactuca sativa
Lsat_1_v5_gn_4_140660 1.0kb upstream 1.0kb upstream 7581   true Lsat_1_v8_lg_4: 273472803-273480383 Lactuca sativa
Lsat_1_v5_gn_4_140660 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 273472803-273473802 Lactuca sativa
Lsat_1_v5_gn_4_140660 1.0kb downstream 1.0kb downstream 7581   true Lsat_1_v8_lg_4: 273473803-273481383 Lactuca sativa
Lsat_1_v5_gn_4_140660 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 273480384-273481383 Lactuca sativa
Lsat_1_v5_gn_4_140660 2.0kb upstream 2.0kb upstream 8581   true Lsat_1_v8_lg_4: 273471803-273480383 Lactuca sativa
Lsat_1_v5_gn_4_140660 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 273471803-273473802 Lactuca sativa
Lsat_1_v5_gn_4_140660 2.0kb downstream 2.0kb downstream 8581   true Lsat_1_v8_lg_4: 273473803-273482383 Lactuca sativa
Lsat_1_v5_gn_4_140660 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 273480384-273482383 Lactuca sativa
Lsat_1_v5_gn_4_140660 5.0kb upstream 5.0kb upstream 11581   true Lsat_1_v8_lg_4: 273468803-273480383 Lactuca sativa
Lsat_1_v5_gn_4_140660 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 273468803-273473802 Lactuca sativa
Lsat_1_v5_gn_4_140660 5.0kb downstream 5.0kb downstream 11581   true Lsat_1_v8_lg_4: 273473803-273485383 Lactuca sativa
Lsat_1_v5_gn_4_140660 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 273480384-273485383 Lactuca sativa
Lsat_1_v5_gn_4_140660 10.0kb upstream 10.0kb upstream 16581   true Lsat_1_v8_lg_4: 273463803-273480383 Lactuca sativa
Lsat_1_v5_gn_4_140660 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 273463803-273473802 Lactuca sativa
Lsat_1_v5_gn_4_140660 10.0kb downstream 10.0kb downstream 16581   true Lsat_1_v8_lg_4: 273473803-273490383 Lactuca sativa
Lsat_1_v5_gn_4_140660 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 273480384-273490383 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468619 5263 Asterids View MSA
123748709 5271 Pentapetalae View MSA
122792464 5272 Eudicot View MSA
122051116 5273 Angiosperm View MSA
121344308 5274 Embryophyte View MSA
123425533 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain