Gene : Lsat_1_v5_gn_4_139981 L. sativa V8
Defline:  (1 of 3) PF00168//PF00514 - C2 domain (C2) // Armadillo/beta-catenin-like repeat (Arm) Genomic Order:  3952
Name:  ? Lsat_1_v5_gn_4_139981 Secondary Identifier:  ? PAC:38933828
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_139981 0.5kb upstream 0.5kb upstream 9877   true Lsat_1_v8_lg_4: 272660061-272669937 Lactuca sativa
Lsat_1_v5_gn_4_139981 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 272660061-272660560 Lactuca sativa
Lsat_1_v5_gn_4_139981 0.5kb downstream 0.5kb downstream 9877   true Lsat_1_v8_lg_4: 272660561-272670437 Lactuca sativa
Lsat_1_v5_gn_4_139981 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 272669938-272670437 Lactuca sativa
Lsat_1_v5_gn_4_139981 1.0kb upstream 1.0kb upstream 10377   true Lsat_1_v8_lg_4: 272659561-272669937 Lactuca sativa
Lsat_1_v5_gn_4_139981 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 272659561-272660560 Lactuca sativa
Lsat_1_v5_gn_4_139981 1.0kb downstream 1.0kb downstream 10377   true Lsat_1_v8_lg_4: 272660561-272670937 Lactuca sativa
Lsat_1_v5_gn_4_139981 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 272669938-272670937 Lactuca sativa
Lsat_1_v5_gn_4_139981 2.0kb upstream 2.0kb upstream 11377   true Lsat_1_v8_lg_4: 272658561-272669937 Lactuca sativa
Lsat_1_v5_gn_4_139981 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 272658561-272660560 Lactuca sativa
Lsat_1_v5_gn_4_139981 2.0kb downstream 2.0kb downstream 11377   true Lsat_1_v8_lg_4: 272660561-272671937 Lactuca sativa
Lsat_1_v5_gn_4_139981 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 272669938-272671937 Lactuca sativa
Lsat_1_v5_gn_4_139981 5.0kb upstream 5.0kb upstream 14377   true Lsat_1_v8_lg_4: 272655561-272669937 Lactuca sativa
Lsat_1_v5_gn_4_139981 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 272655561-272660560 Lactuca sativa
Lsat_1_v5_gn_4_139981 5.0kb downstream 5.0kb downstream 14377   true Lsat_1_v8_lg_4: 272660561-272674937 Lactuca sativa
Lsat_1_v5_gn_4_139981 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 272669938-272674937 Lactuca sativa
Lsat_1_v5_gn_4_139981 10.0kb upstream 10.0kb upstream 19377   true Lsat_1_v8_lg_4: 272650561-272669937 Lactuca sativa
Lsat_1_v5_gn_4_139981 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 272650561-272660560 Lactuca sativa
Lsat_1_v5_gn_4_139981 10.0kb downstream 10.0kb downstream 19377   true Lsat_1_v8_lg_4: 272660561-272679937 Lactuca sativa
Lsat_1_v5_gn_4_139981 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 272669938-272679937 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048106 5273 Angiosperm View MSA
121467662 5263 Asterids View MSA
123740295 5271 Pentapetalae View MSA
122787406 5272 Eudicot View MSA
121347002 5274 Embryophyte View MSA
123380478 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain