Gene : Lsat_1_v5_gn_4_139881 L. sativa V8
Defline:  (1 of 1) PTHR14217//PTHR14217:SF1 - FAMILY NOT NAMED // INOSITOL-TETRAKISPHOSPHATE 1-KINASE Genomic Order:  3947
Name:  ? Lsat_1_v5_gn_4_139881 Secondary Identifier:  ? PAC:38931719
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6365 Lactuca sativa pathologic  
Lsativa PWY-6366 Lactuca sativa pathologic  
Lsativa PWY-6554 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_139881 0.5kb upstream 0.5kb upstream 4742   true Lsat_1_v8_lg_4: 272178772-272183513 Lactuca sativa
Lsat_1_v5_gn_4_139881 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 272178772-272179271 Lactuca sativa
Lsat_1_v5_gn_4_139881 0.5kb downstream 0.5kb downstream 4742   true Lsat_1_v8_lg_4: 272179272-272184013 Lactuca sativa
Lsat_1_v5_gn_4_139881 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 272183514-272184013 Lactuca sativa
Lsat_1_v5_gn_4_139881 1.0kb upstream 1.0kb upstream 5242   true Lsat_1_v8_lg_4: 272178272-272183513 Lactuca sativa
Lsat_1_v5_gn_4_139881 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 272178272-272179271 Lactuca sativa
Lsat_1_v5_gn_4_139881 1.0kb downstream 1.0kb downstream 5242   true Lsat_1_v8_lg_4: 272179272-272184513 Lactuca sativa
Lsat_1_v5_gn_4_139881 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 272183514-272184513 Lactuca sativa
Lsat_1_v5_gn_4_139881 2.0kb upstream 2.0kb upstream 6242   true Lsat_1_v8_lg_4: 272177272-272183513 Lactuca sativa
Lsat_1_v5_gn_4_139881 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 272177272-272179271 Lactuca sativa
Lsat_1_v5_gn_4_139881 2.0kb downstream 2.0kb downstream 6242   true Lsat_1_v8_lg_4: 272179272-272185513 Lactuca sativa
Lsat_1_v5_gn_4_139881 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 272183514-272185513 Lactuca sativa
Lsat_1_v5_gn_4_139881 5.0kb upstream 5.0kb upstream 9242   true Lsat_1_v8_lg_4: 272174272-272183513 Lactuca sativa
Lsat_1_v5_gn_4_139881 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 272174272-272179271 Lactuca sativa
Lsat_1_v5_gn_4_139881 5.0kb downstream 5.0kb downstream 9242   true Lsat_1_v8_lg_4: 272179272-272188513 Lactuca sativa
Lsat_1_v5_gn_4_139881 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 272183514-272188513 Lactuca sativa
Lsat_1_v5_gn_4_139881 10.0kb upstream 10.0kb upstream 14242   true Lsat_1_v8_lg_4: 272169272-272183513 Lactuca sativa
Lsat_1_v5_gn_4_139881 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 272169272-272179271 Lactuca sativa
Lsat_1_v5_gn_4_139881 10.0kb downstream 10.0kb downstream 14242   true Lsat_1_v8_lg_4: 272179272-272193513 Lactuca sativa
Lsat_1_v5_gn_4_139881 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 272183514-272193513 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470861 5263 Asterids View MSA
123738730 5271 Pentapetalae View MSA
122785749 5272 Eudicot View MSA
122045503 5273 Angiosperm View MSA
121345915 5274 Embryophyte View MSA
123428316 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain