Gene : Lsat_1_v5_gn_4_141381 L. sativa V8
Defline:  (1 of 2) 2.6.1.1//2.6.1.78//2.6.1.79 - Aspartate transaminase / Transaminase A // Aspartate--prephenate aminotransferase / Prephenate transaminase // Glutamate--prephenate aminotransferase / Prephenate transaminase Genomic Order:  3986
Name:  ? Lsat_1_v5_gn_4_141381 Secondary Identifier:  ? PAC:38931449
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Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa ASPARTATE-DEG1-PWY Lactuca sativa pathologic  
Lsativa ASPARTATESYN-PWY Lactuca sativa pathologic  
Lsativa PWY-3001 Lactuca sativa pathologic  
Lsativa PWY-3461 Lactuca sativa pathologic  
Lsativa PWY-3462 Lactuca sativa pathologic  
Lsativa PWY-3481 Lactuca sativa pathologic  
Lsativa PWY-7115 Lactuca sativa pathologic  
Lsativa PWY-7117 Lactuca sativa pathologic  
Lsativa THRESYN-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_141381 0.5kb upstream 0.5kb upstream 4924   true Lsat_1_v8_lg_4: 275296373-275301296 Lactuca sativa
Lsat_1_v5_gn_4_141381 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 275296373-275296872 Lactuca sativa
Lsat_1_v5_gn_4_141381 0.5kb downstream 0.5kb downstream 4924   true Lsat_1_v8_lg_4: 275296873-275301796 Lactuca sativa
Lsat_1_v5_gn_4_141381 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 275301297-275301796 Lactuca sativa
Lsat_1_v5_gn_4_141381 1.0kb upstream 1.0kb upstream 5424   true Lsat_1_v8_lg_4: 275295873-275301296 Lactuca sativa
Lsat_1_v5_gn_4_141381 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 275295873-275296872 Lactuca sativa
Lsat_1_v5_gn_4_141381 1.0kb downstream 1.0kb downstream 5424   true Lsat_1_v8_lg_4: 275296873-275302296 Lactuca sativa
Lsat_1_v5_gn_4_141381 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 275301297-275302296 Lactuca sativa
Lsat_1_v5_gn_4_141381 2.0kb upstream 2.0kb upstream 6424   true Lsat_1_v8_lg_4: 275294873-275301296 Lactuca sativa
Lsat_1_v5_gn_4_141381 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 275294873-275296872 Lactuca sativa
Lsat_1_v5_gn_4_141381 2.0kb downstream 2.0kb downstream 6424   true Lsat_1_v8_lg_4: 275296873-275303296 Lactuca sativa
Lsat_1_v5_gn_4_141381 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 275301297-275303296 Lactuca sativa
Lsat_1_v5_gn_4_141381 5.0kb upstream 5.0kb upstream 9424   true Lsat_1_v8_lg_4: 275291873-275301296 Lactuca sativa
Lsat_1_v5_gn_4_141381 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 275291873-275296872 Lactuca sativa
Lsat_1_v5_gn_4_141381 5.0kb downstream 5.0kb downstream 9424   true Lsat_1_v8_lg_4: 275296873-275306296 Lactuca sativa
Lsat_1_v5_gn_4_141381 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 275301297-275306296 Lactuca sativa
Lsat_1_v5_gn_4_141381 10.0kb upstream 10.0kb upstream 14424   true Lsat_1_v8_lg_4: 275286873-275301296 Lactuca sativa
Lsat_1_v5_gn_4_141381 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 275286873-275296872 Lactuca sativa
Lsat_1_v5_gn_4_141381 10.0kb downstream 10.0kb downstream 14424   true Lsat_1_v8_lg_4: 275296873-275311296 Lactuca sativa
Lsat_1_v5_gn_4_141381 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 275301297-275311296 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121783631 5273 Angiosperm View MSA
121444178 5263 Asterids Singleton cluster - no MSA
123755311 5271 Pentapetalae View MSA
122776585 5272 Eudicot View MSA
121055079 5274 Embryophyte View MSA
123095026 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain