Gene : Lsat_1_v5_gn_4_143760 L. sativa V8
Defline:  (1 of 2) PTHR18896:SF60 - PHOSPHOLIPASE D DELTA Genomic Order:  4045
Name:  ? Lsat_1_v5_gn_4_143760 Secondary Identifier:  ? PAC:38932658
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa LIPASYN-PWY Lactuca sativa pathologic  
Lsativa PWY-3561 Lactuca sativa pathologic  
Lsativa PWY-7039 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_143760 0.5kb upstream 0.5kb upstream 5306   true Lsat_1_v8_lg_4: 282766819-282772124 Lactuca sativa
Lsat_1_v5_gn_4_143760 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 282771625-282772124 Lactuca sativa
Lsat_1_v5_gn_4_143760 0.5kb downstream 0.5kb downstream 5306   true Lsat_1_v8_lg_4: 282766319-282771624 Lactuca sativa
Lsat_1_v5_gn_4_143760 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 282766319-282766818 Lactuca sativa
Lsat_1_v5_gn_4_143760 1.0kb upstream 1.0kb upstream 5806   true Lsat_1_v8_lg_4: 282766819-282772624 Lactuca sativa
Lsat_1_v5_gn_4_143760 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 282771625-282772624 Lactuca sativa
Lsat_1_v5_gn_4_143760 1.0kb downstream 1.0kb downstream 5806   true Lsat_1_v8_lg_4: 282765819-282771624 Lactuca sativa
Lsat_1_v5_gn_4_143760 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 282765819-282766818 Lactuca sativa
Lsat_1_v5_gn_4_143760 2.0kb upstream 2.0kb upstream 6806   true Lsat_1_v8_lg_4: 282766819-282773624 Lactuca sativa
Lsat_1_v5_gn_4_143760 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 282771625-282773624 Lactuca sativa
Lsat_1_v5_gn_4_143760 2.0kb downstream 2.0kb downstream 6806   true Lsat_1_v8_lg_4: 282764819-282771624 Lactuca sativa
Lsat_1_v5_gn_4_143760 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 282764819-282766818 Lactuca sativa
Lsat_1_v5_gn_4_143760 5.0kb upstream 5.0kb upstream 9806   true Lsat_1_v8_lg_4: 282766819-282776624 Lactuca sativa
Lsat_1_v5_gn_4_143760 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 282771625-282776624 Lactuca sativa
Lsat_1_v5_gn_4_143760 5.0kb downstream 5.0kb downstream 9806   true Lsat_1_v8_lg_4: 282761819-282771624 Lactuca sativa
Lsat_1_v5_gn_4_143760 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 282761819-282766818 Lactuca sativa
Lsat_1_v5_gn_4_143760 10.0kb upstream 10.0kb upstream 14806   true Lsat_1_v8_lg_4: 282766819-282781624 Lactuca sativa
Lsat_1_v5_gn_4_143760 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 282771625-282781624 Lactuca sativa
Lsat_1_v5_gn_4_143760 10.0kb downstream 10.0kb downstream 14806   true Lsat_1_v8_lg_4: 282756819-282771624 Lactuca sativa
Lsat_1_v5_gn_4_143760 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 282756819-282766818 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466427 5263 Asterids View MSA
123749606 5271 Pentapetalae View MSA
122795845 5272 Eudicot View MSA
122049262 5273 Angiosperm View MSA
121347041 5274 Embryophyte View MSA
123380485 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain