Gene : Lsat_1_v5_gn_3_9661 L. sativa V8
Defline:  (1 of 1) PTHR31071:SF9 - INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-LIKE PROTEIN Genomic Order:  298
Name:  ? Lsat_1_v5_gn_3_9661 Secondary Identifier:  ? PAC:38915331
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_9661 0.5kb upstream 0.5kb upstream 3233   true Lsat_1_v8_lg_3: 13655122-13658354 Lactuca sativa
Lsat_1_v5_gn_3_9661 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 13655122-13655621 Lactuca sativa
Lsat_1_v5_gn_3_9661 0.5kb downstream 0.5kb downstream 3233   true Lsat_1_v8_lg_3: 13655622-13658854 Lactuca sativa
Lsat_1_v5_gn_3_9661 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 13658355-13658854 Lactuca sativa
Lsat_1_v5_gn_3_9661 1.0kb upstream 1.0kb upstream 3733   true Lsat_1_v8_lg_3: 13654622-13658354 Lactuca sativa
Lsat_1_v5_gn_3_9661 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 13654622-13655621 Lactuca sativa
Lsat_1_v5_gn_3_9661 1.0kb downstream 1.0kb downstream 3733   true Lsat_1_v8_lg_3: 13655622-13659354 Lactuca sativa
Lsat_1_v5_gn_3_9661 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 13658355-13659354 Lactuca sativa
Lsat_1_v5_gn_3_9661 2.0kb upstream 2.0kb upstream 4733   true Lsat_1_v8_lg_3: 13653622-13658354 Lactuca sativa
Lsat_1_v5_gn_3_9661 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 13653622-13655621 Lactuca sativa
Lsat_1_v5_gn_3_9661 2.0kb downstream 2.0kb downstream 4733   true Lsat_1_v8_lg_3: 13655622-13660354 Lactuca sativa
Lsat_1_v5_gn_3_9661 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 13658355-13660354 Lactuca sativa
Lsat_1_v5_gn_3_9661 5.0kb upstream 5.0kb upstream 7733   true Lsat_1_v8_lg_3: 13650622-13658354 Lactuca sativa
Lsat_1_v5_gn_3_9661 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 13650622-13655621 Lactuca sativa
Lsat_1_v5_gn_3_9661 5.0kb downstream 5.0kb downstream 7733   true Lsat_1_v8_lg_3: 13655622-13663354 Lactuca sativa
Lsat_1_v5_gn_3_9661 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 13658355-13663354 Lactuca sativa
Lsat_1_v5_gn_3_9661 10.0kb upstream 10.0kb upstream 12733   true Lsat_1_v8_lg_3: 13645622-13658354 Lactuca sativa
Lsat_1_v5_gn_3_9661 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 13645622-13655621 Lactuca sativa
Lsat_1_v5_gn_3_9661 10.0kb downstream 10.0kb downstream 12733   true Lsat_1_v8_lg_3: 13655622-13668354 Lactuca sativa
Lsat_1_v5_gn_3_9661 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 13658355-13668354 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466568 5263 Asterids View MSA
123736575 5271 Pentapetalae View MSA
122797498 5272 Eudicot View MSA
122044970 5273 Angiosperm View MSA
121310375 5274 Embryophyte View MSA
123347876 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain