Gene : Lsat_1_v5_gn_3_95181 L. sativa V8
Defline:  (1 of 1) PTHR12606//PTHR24365 - SENTRIN/SUMO-SPECIFIC PROTEASE // TOLL-LIKE RECEPTOR Genomic Order:  2813
Name:  ? Lsat_1_v5_gn_3_95181 Secondary Identifier:  ? PAC:38917954
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_95181 0.5kb upstream 0.5kb upstream 5273   true Lsat_1_v8_lg_3: 145580089-145585361 Lactuca sativa
Lsat_1_v5_gn_3_95181 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 145580089-145580588 Lactuca sativa
Lsat_1_v5_gn_3_95181 0.5kb downstream 0.5kb downstream 5273   true Lsat_1_v8_lg_3: 145580589-145585861 Lactuca sativa
Lsat_1_v5_gn_3_95181 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 145585362-145585861 Lactuca sativa
Lsat_1_v5_gn_3_95181 1.0kb upstream 1.0kb upstream 5773   true Lsat_1_v8_lg_3: 145579589-145585361 Lactuca sativa
Lsat_1_v5_gn_3_95181 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 145579589-145580588 Lactuca sativa
Lsat_1_v5_gn_3_95181 1.0kb downstream 1.0kb downstream 5773   true Lsat_1_v8_lg_3: 145580589-145586361 Lactuca sativa
Lsat_1_v5_gn_3_95181 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 145585362-145586361 Lactuca sativa
Lsat_1_v5_gn_3_95181 2.0kb upstream 2.0kb upstream 6773   true Lsat_1_v8_lg_3: 145578589-145585361 Lactuca sativa
Lsat_1_v5_gn_3_95181 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 145578589-145580588 Lactuca sativa
Lsat_1_v5_gn_3_95181 2.0kb downstream 2.0kb downstream 6773   true Lsat_1_v8_lg_3: 145580589-145587361 Lactuca sativa
Lsat_1_v5_gn_3_95181 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 145585362-145587361 Lactuca sativa
Lsat_1_v5_gn_3_95181 5.0kb upstream 5.0kb upstream 9773   true Lsat_1_v8_lg_3: 145575589-145585361 Lactuca sativa
Lsat_1_v5_gn_3_95181 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 145575589-145580588 Lactuca sativa
Lsat_1_v5_gn_3_95181 5.0kb downstream 5.0kb downstream 9773   true Lsat_1_v8_lg_3: 145580589-145590361 Lactuca sativa
Lsat_1_v5_gn_3_95181 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 145585362-145590361 Lactuca sativa
Lsat_1_v5_gn_3_95181 10.0kb upstream 10.0kb upstream 14773   true Lsat_1_v8_lg_3: 145570589-145585361 Lactuca sativa
Lsat_1_v5_gn_3_95181 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 145570589-145580588 Lactuca sativa
Lsat_1_v5_gn_3_95181 10.0kb downstream 10.0kb downstream 14773   true Lsat_1_v8_lg_3: 145580589-145595361 Lactuca sativa
Lsat_1_v5_gn_3_95181 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 145585362-145595361 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121450186 5263 Asterids View MSA
123753730 5271 Pentapetalae View MSA
122794426 5272 Eudicot View MSA
122049176 5273 Angiosperm View MSA
123429184 5275 Viridiplantae View MSA
121311282 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain