Gene : Lsat_1_v5_gn_3_95641 L. sativa V8
Defline:  (1 of 479) PF13041 - PPR repeat family (PPR_2) Genomic Order:  2816
Name:  ? Lsat_1_v5_gn_3_95641 Secondary Identifier:  ? PAC:38919106
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_95641 0.5kb upstream 0.5kb upstream 1487   true Lsat_1_v8_lg_3: 146203072-146204558 Lactuca sativa
Lsat_1_v5_gn_3_95641 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 146204059-146204558 Lactuca sativa
Lsat_1_v5_gn_3_95641 0.5kb downstream 0.5kb downstream 1487   true Lsat_1_v8_lg_3: 146202572-146204058 Lactuca sativa
Lsat_1_v5_gn_3_95641 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 146202572-146203071 Lactuca sativa
Lsat_1_v5_gn_3_95641 1.0kb upstream 1.0kb upstream 1987   true Lsat_1_v8_lg_3: 146203072-146205058 Lactuca sativa
Lsat_1_v5_gn_3_95641 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 146204059-146205058 Lactuca sativa
Lsat_1_v5_gn_3_95641 1.0kb downstream 1.0kb downstream 1987   true Lsat_1_v8_lg_3: 146202072-146204058 Lactuca sativa
Lsat_1_v5_gn_3_95641 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 146202072-146203071 Lactuca sativa
Lsat_1_v5_gn_3_95641 2.0kb upstream 2.0kb upstream 2987   true Lsat_1_v8_lg_3: 146203072-146206058 Lactuca sativa
Lsat_1_v5_gn_3_95641 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 146204059-146206058 Lactuca sativa
Lsat_1_v5_gn_3_95641 2.0kb downstream 2.0kb downstream 2987   true Lsat_1_v8_lg_3: 146201072-146204058 Lactuca sativa
Lsat_1_v5_gn_3_95641 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 146201072-146203071 Lactuca sativa
Lsat_1_v5_gn_3_95641 5.0kb upstream 5.0kb upstream 5987   true Lsat_1_v8_lg_3: 146203072-146209058 Lactuca sativa
Lsat_1_v5_gn_3_95641 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 146204059-146209058 Lactuca sativa
Lsat_1_v5_gn_3_95641 5.0kb downstream 5.0kb downstream 5987   true Lsat_1_v8_lg_3: 146198072-146204058 Lactuca sativa
Lsat_1_v5_gn_3_95641 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 146198072-146203071 Lactuca sativa
Lsat_1_v5_gn_3_95641 10.0kb upstream 10.0kb upstream 10987   true Lsat_1_v8_lg_3: 146203072-146214058 Lactuca sativa
Lsat_1_v5_gn_3_95641 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 146204059-146214058 Lactuca sativa
Lsat_1_v5_gn_3_95641 10.0kb downstream 10.0kb downstream 10987   true Lsat_1_v8_lg_3: 146193072-146204058 Lactuca sativa
Lsat_1_v5_gn_3_95641 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 146193072-146203071 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121452015 5263 Asterids View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain