Gene : Lsat_1_v5_gn_3_98860 L. sativa V8
Defline:  (1 of 2) PTHR13169//PTHR13169:SF4 - UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN // MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1-RELATED Genomic Order:  2888
Name:  ? Lsat_1_v5_gn_3_98860 Secondary Identifier:  ? PAC:38921036
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_98860 0.5kb upstream 0.5kb upstream 3603   true Lsat_1_v8_lg_3: 155246348-155249950 Lactuca sativa
Lsat_1_v5_gn_3_98860 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 155249451-155249950 Lactuca sativa
Lsat_1_v5_gn_3_98860 0.5kb downstream 0.5kb downstream 3603   true Lsat_1_v8_lg_3: 155245848-155249450 Lactuca sativa
Lsat_1_v5_gn_3_98860 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 155245848-155246347 Lactuca sativa
Lsat_1_v5_gn_3_98860 1.0kb upstream 1.0kb upstream 4103   true Lsat_1_v8_lg_3: 155246348-155250450 Lactuca sativa
Lsat_1_v5_gn_3_98860 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 155249451-155250450 Lactuca sativa
Lsat_1_v5_gn_3_98860 1.0kb downstream 1.0kb downstream 4103   true Lsat_1_v8_lg_3: 155245348-155249450 Lactuca sativa
Lsat_1_v5_gn_3_98860 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 155245348-155246347 Lactuca sativa
Lsat_1_v5_gn_3_98860 2.0kb upstream 2.0kb upstream 5103   true Lsat_1_v8_lg_3: 155246348-155251450 Lactuca sativa
Lsat_1_v5_gn_3_98860 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 155249451-155251450 Lactuca sativa
Lsat_1_v5_gn_3_98860 2.0kb downstream 2.0kb downstream 5103   true Lsat_1_v8_lg_3: 155244348-155249450 Lactuca sativa
Lsat_1_v5_gn_3_98860 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 155244348-155246347 Lactuca sativa
Lsat_1_v5_gn_3_98860 5.0kb upstream 5.0kb upstream 8103   true Lsat_1_v8_lg_3: 155246348-155254450 Lactuca sativa
Lsat_1_v5_gn_3_98860 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 155249451-155254450 Lactuca sativa
Lsat_1_v5_gn_3_98860 5.0kb downstream 5.0kb downstream 8103   true Lsat_1_v8_lg_3: 155241348-155249450 Lactuca sativa
Lsat_1_v5_gn_3_98860 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 155241348-155246347 Lactuca sativa
Lsat_1_v5_gn_3_98860 10.0kb upstream 10.0kb upstream 13103   true Lsat_1_v8_lg_3: 155246348-155259450 Lactuca sativa
Lsat_1_v5_gn_3_98860 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 155249451-155259450 Lactuca sativa
Lsat_1_v5_gn_3_98860 10.0kb downstream 10.0kb downstream 13103   true Lsat_1_v8_lg_3: 155236348-155249450 Lactuca sativa
Lsat_1_v5_gn_3_98860 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 155236348-155246347 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481738 5263 Asterids View MSA
123741686 5271 Pentapetalae View MSA
122788977 5272 Eudicot View MSA
122050739 5273 Angiosperm View MSA
121344338 5274 Embryophyte View MSA
123427741 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain