Gene : Lsat_1_v5_gn_3_98660 L. sativa V8
Defline:  (1 of 7) 3.1.3.16//3.1.3.48//3.1.3.67 - Protein-serine/threonine phosphatase / Serine/threonine specific protein phosphatase // Protein-tyrosine-phosphatase / PTPase // Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase / Phosphatidylinositol-3,4,5-trisphosphate 3-phosphohydrolase Genomic Order:  2894
Name:  ? Lsat_1_v5_gn_3_98660 Secondary Identifier:  ? PAC:38921294
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6368 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_98660 0.5kb upstream 0.5kb upstream 2365   true Lsat_1_v8_lg_3: 155476254-155478618 Lactuca sativa
Lsat_1_v5_gn_3_98660 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 155478119-155478618 Lactuca sativa
Lsat_1_v5_gn_3_98660 0.5kb downstream 0.5kb downstream 2365   true Lsat_1_v8_lg_3: 155475754-155478118 Lactuca sativa
Lsat_1_v5_gn_3_98660 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 155475754-155476253 Lactuca sativa
Lsat_1_v5_gn_3_98660 1.0kb upstream 1.0kb upstream 2865   true Lsat_1_v8_lg_3: 155476254-155479118 Lactuca sativa
Lsat_1_v5_gn_3_98660 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 155478119-155479118 Lactuca sativa
Lsat_1_v5_gn_3_98660 1.0kb downstream 1.0kb downstream 2865   true Lsat_1_v8_lg_3: 155475254-155478118 Lactuca sativa
Lsat_1_v5_gn_3_98660 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 155475254-155476253 Lactuca sativa
Lsat_1_v5_gn_3_98660 2.0kb upstream 2.0kb upstream 3865   true Lsat_1_v8_lg_3: 155476254-155480118 Lactuca sativa
Lsat_1_v5_gn_3_98660 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 155478119-155480118 Lactuca sativa
Lsat_1_v5_gn_3_98660 2.0kb downstream 2.0kb downstream 3865   true Lsat_1_v8_lg_3: 155474254-155478118 Lactuca sativa
Lsat_1_v5_gn_3_98660 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 155474254-155476253 Lactuca sativa
Lsat_1_v5_gn_3_98660 5.0kb upstream 5.0kb upstream 6865   true Lsat_1_v8_lg_3: 155476254-155483118 Lactuca sativa
Lsat_1_v5_gn_3_98660 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 155478119-155483118 Lactuca sativa
Lsat_1_v5_gn_3_98660 5.0kb downstream 5.0kb downstream 6865   true Lsat_1_v8_lg_3: 155471254-155478118 Lactuca sativa
Lsat_1_v5_gn_3_98660 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 155471254-155476253 Lactuca sativa
Lsat_1_v5_gn_3_98660 10.0kb upstream 10.0kb upstream 11865   true Lsat_1_v8_lg_3: 155476254-155488118 Lactuca sativa
Lsat_1_v5_gn_3_98660 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 155478119-155488118 Lactuca sativa
Lsat_1_v5_gn_3_98660 10.0kb downstream 10.0kb downstream 11865   true Lsat_1_v8_lg_3: 155466254-155478118 Lactuca sativa
Lsat_1_v5_gn_3_98660 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 155466254-155476253 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467575 5263 Asterids View MSA
123737073 5271 Pentapetalae View MSA
122787177 5272 Eudicot View MSA
122048056 5273 Angiosperm View MSA
121345998 5274 Embryophyte View MSA
123380306 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain