Gene : Lsat_1_v5_gn_4_102040 L. sativa V8
Defline:  (1 of 1) K11273 - chromosome transmission fidelity protein 1 [EC:3.6.4.13] (DDX11, CHL1, CTF1) Genomic Order:  2952
Name:  ? Lsat_1_v5_gn_4_102040 Secondary Identifier:  ? PAC:38931062
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_102040 0.5kb upstream 0.5kb upstream 4066   true Lsat_1_v8_lg_4: 173864225-173868290 Lactuca sativa
Lsat_1_v5_gn_4_102040 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 173867791-173868290 Lactuca sativa
Lsat_1_v5_gn_4_102040 0.5kb downstream 0.5kb downstream 4066   true Lsat_1_v8_lg_4: 173863725-173867790 Lactuca sativa
Lsat_1_v5_gn_4_102040 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 173863725-173864224 Lactuca sativa
Lsat_1_v5_gn_4_102040 1.0kb upstream 1.0kb upstream 4566   true Lsat_1_v8_lg_4: 173864225-173868790 Lactuca sativa
Lsat_1_v5_gn_4_102040 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 173867791-173868790 Lactuca sativa
Lsat_1_v5_gn_4_102040 1.0kb downstream 1.0kb downstream 4566   true Lsat_1_v8_lg_4: 173863225-173867790 Lactuca sativa
Lsat_1_v5_gn_4_102040 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 173863225-173864224 Lactuca sativa
Lsat_1_v5_gn_4_102040 2.0kb upstream 2.0kb upstream 5566   true Lsat_1_v8_lg_4: 173864225-173869790 Lactuca sativa
Lsat_1_v5_gn_4_102040 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 173867791-173869790 Lactuca sativa
Lsat_1_v5_gn_4_102040 2.0kb downstream 2.0kb downstream 5566   true Lsat_1_v8_lg_4: 173862225-173867790 Lactuca sativa
Lsat_1_v5_gn_4_102040 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 173862225-173864224 Lactuca sativa
Lsat_1_v5_gn_4_102040 5.0kb upstream 5.0kb upstream 8566   true Lsat_1_v8_lg_4: 173864225-173872790 Lactuca sativa
Lsat_1_v5_gn_4_102040 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 173867791-173872790 Lactuca sativa
Lsat_1_v5_gn_4_102040 5.0kb downstream 5.0kb downstream 8566   true Lsat_1_v8_lg_4: 173859225-173867790 Lactuca sativa
Lsat_1_v5_gn_4_102040 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 173859225-173864224 Lactuca sativa
Lsat_1_v5_gn_4_102040 10.0kb upstream 10.0kb upstream 13566   true Lsat_1_v8_lg_4: 173864225-173877790 Lactuca sativa
Lsat_1_v5_gn_4_102040 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 173867791-173877790 Lactuca sativa
Lsat_1_v5_gn_4_102040 10.0kb downstream 10.0kb downstream 13566   true Lsat_1_v8_lg_4: 173854225-173867790 Lactuca sativa
Lsat_1_v5_gn_4_102040 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 173854225-173864224 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470375 5263 Asterids View MSA
123739060 5271 Pentapetalae View MSA
122791731 5272 Eudicot View MSA
122044733 5273 Angiosperm View MSA
121346490 5274 Embryophyte View MSA
123426390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain