Gene : Lsat_1_v5_gn_4_103420 L. sativa V8
Defline:  (1 of 1) PTHR12526//PTHR12526:SF160 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  2988
Name:  ? Lsat_1_v5_gn_4_103420 Secondary Identifier:  ? PAC:38929719
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_103420 0.5kb upstream 0.5kb upstream 5215   true Lsat_1_v8_lg_4: 175835114-175840328 Lactuca sativa
Lsat_1_v5_gn_4_103420 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 175835114-175835613 Lactuca sativa
Lsat_1_v5_gn_4_103420 0.5kb downstream 0.5kb downstream 5215   true Lsat_1_v8_lg_4: 175835614-175840828 Lactuca sativa
Lsat_1_v5_gn_4_103420 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 175840329-175840828 Lactuca sativa
Lsat_1_v5_gn_4_103420 1.0kb upstream 1.0kb upstream 5715   true Lsat_1_v8_lg_4: 175834614-175840328 Lactuca sativa
Lsat_1_v5_gn_4_103420 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 175834614-175835613 Lactuca sativa
Lsat_1_v5_gn_4_103420 1.0kb downstream 1.0kb downstream 5715   true Lsat_1_v8_lg_4: 175835614-175841328 Lactuca sativa
Lsat_1_v5_gn_4_103420 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 175840329-175841328 Lactuca sativa
Lsat_1_v5_gn_4_103420 2.0kb upstream 2.0kb upstream 6715   true Lsat_1_v8_lg_4: 175833614-175840328 Lactuca sativa
Lsat_1_v5_gn_4_103420 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 175833614-175835613 Lactuca sativa
Lsat_1_v5_gn_4_103420 2.0kb downstream 2.0kb downstream 6715   true Lsat_1_v8_lg_4: 175835614-175842328 Lactuca sativa
Lsat_1_v5_gn_4_103420 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 175840329-175842328 Lactuca sativa
Lsat_1_v5_gn_4_103420 5.0kb upstream 5.0kb upstream 9715   true Lsat_1_v8_lg_4: 175830614-175840328 Lactuca sativa
Lsat_1_v5_gn_4_103420 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 175830614-175835613 Lactuca sativa
Lsat_1_v5_gn_4_103420 5.0kb downstream 5.0kb downstream 9715   true Lsat_1_v8_lg_4: 175835614-175845328 Lactuca sativa
Lsat_1_v5_gn_4_103420 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 175840329-175845328 Lactuca sativa
Lsat_1_v5_gn_4_103420 10.0kb upstream 10.0kb upstream 14715   true Lsat_1_v8_lg_4: 175825614-175840328 Lactuca sativa
Lsat_1_v5_gn_4_103420 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 175825614-175835613 Lactuca sativa
Lsat_1_v5_gn_4_103420 10.0kb downstream 10.0kb downstream 14715   true Lsat_1_v8_lg_4: 175835614-175850328 Lactuca sativa
Lsat_1_v5_gn_4_103420 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 175840329-175850328 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479829 5263 Asterids View MSA
123748931 5271 Pentapetalae View MSA
122790336 5272 Eudicot View MSA
122046924 5273 Angiosperm View MSA
121347329 5274 Embryophyte View MSA
123380528 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain