Gene : Lsat_1_v5_gn_4_102880 L. sativa V8
Defline:  (1 of 1) PTHR24326//PTHR24326:SF272 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 Genomic Order:  2960
Name:  ? Lsat_1_v5_gn_4_102880 Secondary Identifier:  ? PAC:38933425
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_102880 0.5kb upstream 0.5kb upstream 5322   true Lsat_1_v8_lg_4: 174298164-174303485 Lactuca sativa
Lsat_1_v5_gn_4_102880 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 174302986-174303485 Lactuca sativa
Lsat_1_v5_gn_4_102880 0.5kb downstream 0.5kb downstream 5322   true Lsat_1_v8_lg_4: 174297664-174302985 Lactuca sativa
Lsat_1_v5_gn_4_102880 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 174297664-174298163 Lactuca sativa
Lsat_1_v5_gn_4_102880 1.0kb upstream 1.0kb upstream 5822   true Lsat_1_v8_lg_4: 174298164-174303985 Lactuca sativa
Lsat_1_v5_gn_4_102880 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 174302986-174303985 Lactuca sativa
Lsat_1_v5_gn_4_102880 1.0kb downstream 1.0kb downstream 5822   true Lsat_1_v8_lg_4: 174297164-174302985 Lactuca sativa
Lsat_1_v5_gn_4_102880 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 174297164-174298163 Lactuca sativa
Lsat_1_v5_gn_4_102880 2.0kb upstream 2.0kb upstream 6822   true Lsat_1_v8_lg_4: 174298164-174304985 Lactuca sativa
Lsat_1_v5_gn_4_102880 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 174302986-174304985 Lactuca sativa
Lsat_1_v5_gn_4_102880 2.0kb downstream 2.0kb downstream 6822   true Lsat_1_v8_lg_4: 174296164-174302985 Lactuca sativa
Lsat_1_v5_gn_4_102880 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 174296164-174298163 Lactuca sativa
Lsat_1_v5_gn_4_102880 5.0kb upstream 5.0kb upstream 9822   true Lsat_1_v8_lg_4: 174298164-174307985 Lactuca sativa
Lsat_1_v5_gn_4_102880 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 174302986-174307985 Lactuca sativa
Lsat_1_v5_gn_4_102880 5.0kb downstream 5.0kb downstream 9822   true Lsat_1_v8_lg_4: 174293164-174302985 Lactuca sativa
Lsat_1_v5_gn_4_102880 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 174293164-174298163 Lactuca sativa
Lsat_1_v5_gn_4_102880 10.0kb upstream 10.0kb upstream 14822   true Lsat_1_v8_lg_4: 174298164-174312985 Lactuca sativa
Lsat_1_v5_gn_4_102880 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 174302986-174312985 Lactuca sativa
Lsat_1_v5_gn_4_102880 10.0kb downstream 10.0kb downstream 14822   true Lsat_1_v8_lg_4: 174288164-174302985 Lactuca sativa
Lsat_1_v5_gn_4_102880 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 174288164-174298163 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475385 5263 Asterids View MSA
123746219 5271 Pentapetalae View MSA
122794350 5272 Eudicot View MSA
122048483 5273 Angiosperm View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain