Gene : Lsat_1_v5_gn_4_106121 L. sativa V8
Defline:  (1 of 1) PTHR10366//PTHR10366:SF343 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Genomic Order:  3036
Name:  ? Lsat_1_v5_gn_4_106121 Secondary Identifier:  ? PAC:38934403
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_106121 0.5kb upstream 0.5kb upstream 3856   true Lsat_1_v8_lg_4: 179208586-179212441 Lactuca sativa
Lsat_1_v5_gn_4_106121 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 179211942-179212441 Lactuca sativa
Lsat_1_v5_gn_4_106121 0.5kb downstream 0.5kb downstream 3856   true Lsat_1_v8_lg_4: 179208086-179211941 Lactuca sativa
Lsat_1_v5_gn_4_106121 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 179208086-179208585 Lactuca sativa
Lsat_1_v5_gn_4_106121 1.0kb upstream 1.0kb upstream 4356   true Lsat_1_v8_lg_4: 179208586-179212941 Lactuca sativa
Lsat_1_v5_gn_4_106121 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 179211942-179212941 Lactuca sativa
Lsat_1_v5_gn_4_106121 1.0kb downstream 1.0kb downstream 4356   true Lsat_1_v8_lg_4: 179207586-179211941 Lactuca sativa
Lsat_1_v5_gn_4_106121 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 179207586-179208585 Lactuca sativa
Lsat_1_v5_gn_4_106121 2.0kb upstream 2.0kb upstream 5356   true Lsat_1_v8_lg_4: 179208586-179213941 Lactuca sativa
Lsat_1_v5_gn_4_106121 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 179211942-179213941 Lactuca sativa
Lsat_1_v5_gn_4_106121 2.0kb downstream 2.0kb downstream 5356   true Lsat_1_v8_lg_4: 179206586-179211941 Lactuca sativa
Lsat_1_v5_gn_4_106121 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 179206586-179208585 Lactuca sativa
Lsat_1_v5_gn_4_106121 5.0kb upstream 5.0kb upstream 8356   true Lsat_1_v8_lg_4: 179208586-179216941 Lactuca sativa
Lsat_1_v5_gn_4_106121 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 179211942-179216941 Lactuca sativa
Lsat_1_v5_gn_4_106121 5.0kb downstream 5.0kb downstream 8356   true Lsat_1_v8_lg_4: 179203586-179211941 Lactuca sativa
Lsat_1_v5_gn_4_106121 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 179203586-179208585 Lactuca sativa
Lsat_1_v5_gn_4_106121 10.0kb upstream 10.0kb upstream 13356   true Lsat_1_v8_lg_4: 179208586-179221941 Lactuca sativa
Lsat_1_v5_gn_4_106121 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 179211942-179221941 Lactuca sativa
Lsat_1_v5_gn_4_106121 10.0kb downstream 10.0kb downstream 13356   true Lsat_1_v8_lg_4: 179198586-179211941 Lactuca sativa
Lsat_1_v5_gn_4_106121 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 179198586-179208585 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472531 5263 Asterids View MSA
123739581 5271 Pentapetalae View MSA
122792894 5272 Eudicot View MSA
122046159 5273 Angiosperm View MSA
121349944 5274 Embryophyte View MSA
123424676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain