Gene : Lsat_1_v5_gn_4_106021 L. sativa V8
Defline:  (1 of 1) PTHR12220//PTHR12220:SF14 - 50S/60S RIBOSOMAL PROTEIN L16 // SUBFAMILY NOT NAMED Genomic Order:  3048
Name:  ? Lsat_1_v5_gn_4_106021 Secondary Identifier:  ? PAC:38933915
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_106021 0.5kb upstream 0.5kb upstream 998   true Lsat_1_v8_lg_4: 179466865-179467862 Lactuca sativa
Lsat_1_v5_gn_4_106021 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 179467363-179467862 Lactuca sativa
Lsat_1_v5_gn_4_106021 0.5kb downstream 0.5kb downstream 998   true Lsat_1_v8_lg_4: 179466365-179467362 Lactuca sativa
Lsat_1_v5_gn_4_106021 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 179466365-179466864 Lactuca sativa
Lsat_1_v5_gn_4_106021 1.0kb upstream 1.0kb upstream 1498   true Lsat_1_v8_lg_4: 179466865-179468362 Lactuca sativa
Lsat_1_v5_gn_4_106021 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 179467363-179468362 Lactuca sativa
Lsat_1_v5_gn_4_106021 1.0kb downstream 1.0kb downstream 1498   true Lsat_1_v8_lg_4: 179465865-179467362 Lactuca sativa
Lsat_1_v5_gn_4_106021 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 179465865-179466864 Lactuca sativa
Lsat_1_v5_gn_4_106021 2.0kb upstream 2.0kb upstream 2498   true Lsat_1_v8_lg_4: 179466865-179469362 Lactuca sativa
Lsat_1_v5_gn_4_106021 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 179467363-179469362 Lactuca sativa
Lsat_1_v5_gn_4_106021 2.0kb downstream 2.0kb downstream 2498   true Lsat_1_v8_lg_4: 179464865-179467362 Lactuca sativa
Lsat_1_v5_gn_4_106021 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 179464865-179466864 Lactuca sativa
Lsat_1_v5_gn_4_106021 5.0kb upstream 5.0kb upstream 5498   true Lsat_1_v8_lg_4: 179466865-179472362 Lactuca sativa
Lsat_1_v5_gn_4_106021 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 179467363-179472362 Lactuca sativa
Lsat_1_v5_gn_4_106021 5.0kb downstream 5.0kb downstream 5498   true Lsat_1_v8_lg_4: 179461865-179467362 Lactuca sativa
Lsat_1_v5_gn_4_106021 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 179461865-179466864 Lactuca sativa
Lsat_1_v5_gn_4_106021 10.0kb upstream 10.0kb upstream 10498   true Lsat_1_v8_lg_4: 179466865-179477362 Lactuca sativa
Lsat_1_v5_gn_4_106021 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 179467363-179477362 Lactuca sativa
Lsat_1_v5_gn_4_106021 10.0kb downstream 10.0kb downstream 10498   true Lsat_1_v8_lg_4: 179456865-179467362 Lactuca sativa
Lsat_1_v5_gn_4_106021 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 179456865-179466864 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481566 5263 Asterids View MSA
123748871 5271 Pentapetalae View MSA
122796002 5272 Eudicot View MSA
122041743 5273 Angiosperm View MSA
123429161 5275 Viridiplantae View MSA
121350825 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain