Gene : Lsat_1_v5_gn_4_106820 L. sativa V8
Defline:  (1 of 2) K16276 - zinc finger protein-like protein (K16276, BTS) Genomic Order:  3073
Name:  ? Lsat_1_v5_gn_4_106820 Secondary Identifier:  ? PAC:38932801
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7511 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_106820 0.5kb upstream 0.5kb upstream 8733   true Lsat_1_v8_lg_4: 181507134-181515866 Lactuca sativa
Lsat_1_v5_gn_4_106820 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 181507134-181507633 Lactuca sativa
Lsat_1_v5_gn_4_106820 0.5kb downstream 0.5kb downstream 8733   true Lsat_1_v8_lg_4: 181507634-181516366 Lactuca sativa
Lsat_1_v5_gn_4_106820 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 181515867-181516366 Lactuca sativa
Lsat_1_v5_gn_4_106820 1.0kb upstream 1.0kb upstream 9233   true Lsat_1_v8_lg_4: 181506634-181515866 Lactuca sativa
Lsat_1_v5_gn_4_106820 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 181506634-181507633 Lactuca sativa
Lsat_1_v5_gn_4_106820 1.0kb downstream 1.0kb downstream 9233   true Lsat_1_v8_lg_4: 181507634-181516866 Lactuca sativa
Lsat_1_v5_gn_4_106820 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 181515867-181516866 Lactuca sativa
Lsat_1_v5_gn_4_106820 2.0kb upstream 2.0kb upstream 10233   true Lsat_1_v8_lg_4: 181505634-181515866 Lactuca sativa
Lsat_1_v5_gn_4_106820 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 181505634-181507633 Lactuca sativa
Lsat_1_v5_gn_4_106820 2.0kb downstream 2.0kb downstream 10233   true Lsat_1_v8_lg_4: 181507634-181517866 Lactuca sativa
Lsat_1_v5_gn_4_106820 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 181515867-181517866 Lactuca sativa
Lsat_1_v5_gn_4_106820 5.0kb upstream 5.0kb upstream 13233   true Lsat_1_v8_lg_4: 181502634-181515866 Lactuca sativa
Lsat_1_v5_gn_4_106820 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 181502634-181507633 Lactuca sativa
Lsat_1_v5_gn_4_106820 5.0kb downstream 5.0kb downstream 13233   true Lsat_1_v8_lg_4: 181507634-181520866 Lactuca sativa
Lsat_1_v5_gn_4_106820 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 181515867-181520866 Lactuca sativa
Lsat_1_v5_gn_4_106820 10.0kb upstream 10.0kb upstream 18233   true Lsat_1_v8_lg_4: 181497634-181515866 Lactuca sativa
Lsat_1_v5_gn_4_106820 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 181497634-181507633 Lactuca sativa
Lsat_1_v5_gn_4_106820 10.0kb downstream 10.0kb downstream 18233   true Lsat_1_v8_lg_4: 181507634-181525866 Lactuca sativa
Lsat_1_v5_gn_4_106820 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 181515867-181525866 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469121 5263 Asterids View MSA
123743413 5271 Pentapetalae View MSA
122790004 5272 Eudicot View MSA
122047208 5273 Angiosperm View MSA
121348001 5274 Embryophyte View MSA
123428436 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain