Gene : Lsat_1_v5_gn_4_108900 L. sativa V8
Defline:  (1 of 2) PTHR12300//PTHR12300:SF52 - HVA22-LIKE PROTEINS // HVA22-LIKE PROTEIN A-RELATED Genomic Order:  3117
Name:  ? Lsat_1_v5_gn_4_108900 Secondary Identifier:  ? PAC:38932430
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_108900 0.5kb upstream 0.5kb upstream 6299   true Lsat_1_v8_lg_4: 186842425-186848723 Lactuca sativa
Lsat_1_v5_gn_4_108900 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 186842425-186842924 Lactuca sativa
Lsat_1_v5_gn_4_108900 0.5kb downstream 0.5kb downstream 6299   true Lsat_1_v8_lg_4: 186842925-186849223 Lactuca sativa
Lsat_1_v5_gn_4_108900 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 186848724-186849223 Lactuca sativa
Lsat_1_v5_gn_4_108900 1.0kb upstream 1.0kb upstream 6799   true Lsat_1_v8_lg_4: 186841925-186848723 Lactuca sativa
Lsat_1_v5_gn_4_108900 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 186841925-186842924 Lactuca sativa
Lsat_1_v5_gn_4_108900 1.0kb downstream 1.0kb downstream 6799   true Lsat_1_v8_lg_4: 186842925-186849723 Lactuca sativa
Lsat_1_v5_gn_4_108900 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 186848724-186849723 Lactuca sativa
Lsat_1_v5_gn_4_108900 2.0kb upstream 2.0kb upstream 7799   true Lsat_1_v8_lg_4: 186840925-186848723 Lactuca sativa
Lsat_1_v5_gn_4_108900 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 186840925-186842924 Lactuca sativa
Lsat_1_v5_gn_4_108900 2.0kb downstream 2.0kb downstream 7799   true Lsat_1_v8_lg_4: 186842925-186850723 Lactuca sativa
Lsat_1_v5_gn_4_108900 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 186848724-186850723 Lactuca sativa
Lsat_1_v5_gn_4_108900 5.0kb upstream 5.0kb upstream 10799   true Lsat_1_v8_lg_4: 186837925-186848723 Lactuca sativa
Lsat_1_v5_gn_4_108900 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 186837925-186842924 Lactuca sativa
Lsat_1_v5_gn_4_108900 5.0kb downstream 5.0kb downstream 10799   true Lsat_1_v8_lg_4: 186842925-186853723 Lactuca sativa
Lsat_1_v5_gn_4_108900 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 186848724-186853723 Lactuca sativa
Lsat_1_v5_gn_4_108900 10.0kb upstream 10.0kb upstream 15799   true Lsat_1_v8_lg_4: 186832925-186848723 Lactuca sativa
Lsat_1_v5_gn_4_108900 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 186832925-186842924 Lactuca sativa
Lsat_1_v5_gn_4_108900 10.0kb downstream 10.0kb downstream 15799   true Lsat_1_v8_lg_4: 186842925-186858723 Lactuca sativa
Lsat_1_v5_gn_4_108900 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 186848724-186858723 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469631 5263 Asterids View MSA
123753411 5271 Pentapetalae View MSA
122797924 5272 Eudicot View MSA
122050358 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain