Gene : Lsat_1_v5_gn_4_108241 L. sativa V8
Defline:  (1 of 5) PTHR11945:SF179 - MADS-BOX PROTEIN SVP Genomic Order:  3125
Name:  ? Lsat_1_v5_gn_4_108241 Secondary Identifier:  ? PAC:38932423
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_108241 0.5kb upstream 0.5kb upstream 20716   true Lsat_1_v8_lg_4: 187394609-187415324 Lactuca sativa
Lsat_1_v5_gn_4_108241 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 187414825-187415324 Lactuca sativa
Lsat_1_v5_gn_4_108241 0.5kb downstream 0.5kb downstream 20716   true Lsat_1_v8_lg_4: 187394109-187414824 Lactuca sativa
Lsat_1_v5_gn_4_108241 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 187394109-187394608 Lactuca sativa
Lsat_1_v5_gn_4_108241 1.0kb upstream 1.0kb upstream 21216   true Lsat_1_v8_lg_4: 187394609-187415824 Lactuca sativa
Lsat_1_v5_gn_4_108241 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 187414825-187415824 Lactuca sativa
Lsat_1_v5_gn_4_108241 1.0kb downstream 1.0kb downstream 21216   true Lsat_1_v8_lg_4: 187393609-187414824 Lactuca sativa
Lsat_1_v5_gn_4_108241 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 187393609-187394608 Lactuca sativa
Lsat_1_v5_gn_4_108241 2.0kb upstream 2.0kb upstream 22216   true Lsat_1_v8_lg_4: 187394609-187416824 Lactuca sativa
Lsat_1_v5_gn_4_108241 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 187414825-187416824 Lactuca sativa
Lsat_1_v5_gn_4_108241 2.0kb downstream 2.0kb downstream 22216   true Lsat_1_v8_lg_4: 187392609-187414824 Lactuca sativa
Lsat_1_v5_gn_4_108241 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 187392609-187394608 Lactuca sativa
Lsat_1_v5_gn_4_108241 5.0kb upstream 5.0kb upstream 25216   true Lsat_1_v8_lg_4: 187394609-187419824 Lactuca sativa
Lsat_1_v5_gn_4_108241 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 187414825-187419824 Lactuca sativa
Lsat_1_v5_gn_4_108241 5.0kb downstream 5.0kb downstream 25216   true Lsat_1_v8_lg_4: 187389609-187414824 Lactuca sativa
Lsat_1_v5_gn_4_108241 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 187389609-187394608 Lactuca sativa
Lsat_1_v5_gn_4_108241 10.0kb upstream 10.0kb upstream 30216   true Lsat_1_v8_lg_4: 187394609-187424824 Lactuca sativa
Lsat_1_v5_gn_4_108241 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 187414825-187424824 Lactuca sativa
Lsat_1_v5_gn_4_108241 10.0kb downstream 10.0kb downstream 30216   true Lsat_1_v8_lg_4: 187384609-187414824 Lactuca sativa
Lsat_1_v5_gn_4_108241 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 187384609-187394608 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477703 5263 Asterids View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain