Gene : Lsat_1_v5_gn_4_110600 L. sativa V8
Defline:  (1 of 4) K03695 - ATP-dependent Clp protease ATP-binding subunit ClpB (clpB) Genomic Order:  3185
Name:  ? Lsat_1_v5_gn_4_110600 Secondary Identifier:  ? PAC:38931512
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_110600 0.5kb upstream 0.5kb upstream 4116   true Lsat_1_v8_lg_4: 192805002-192809117 Lactuca sativa
Lsat_1_v5_gn_4_110600 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 192808618-192809117 Lactuca sativa
Lsat_1_v5_gn_4_110600 0.5kb downstream 0.5kb downstream 4116   true Lsat_1_v8_lg_4: 192804502-192808617 Lactuca sativa
Lsat_1_v5_gn_4_110600 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 192804502-192805001 Lactuca sativa
Lsat_1_v5_gn_4_110600 1.0kb upstream 1.0kb upstream 4616   true Lsat_1_v8_lg_4: 192805002-192809617 Lactuca sativa
Lsat_1_v5_gn_4_110600 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 192808618-192809617 Lactuca sativa
Lsat_1_v5_gn_4_110600 1.0kb downstream 1.0kb downstream 4616   true Lsat_1_v8_lg_4: 192804002-192808617 Lactuca sativa
Lsat_1_v5_gn_4_110600 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 192804002-192805001 Lactuca sativa
Lsat_1_v5_gn_4_110600 2.0kb upstream 2.0kb upstream 5616   true Lsat_1_v8_lg_4: 192805002-192810617 Lactuca sativa
Lsat_1_v5_gn_4_110600 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 192808618-192810617 Lactuca sativa
Lsat_1_v5_gn_4_110600 2.0kb downstream 2.0kb downstream 5616   true Lsat_1_v8_lg_4: 192803002-192808617 Lactuca sativa
Lsat_1_v5_gn_4_110600 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 192803002-192805001 Lactuca sativa
Lsat_1_v5_gn_4_110600 5.0kb upstream 5.0kb upstream 8616   true Lsat_1_v8_lg_4: 192805002-192813617 Lactuca sativa
Lsat_1_v5_gn_4_110600 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 192808618-192813617 Lactuca sativa
Lsat_1_v5_gn_4_110600 5.0kb downstream 5.0kb downstream 8616   true Lsat_1_v8_lg_4: 192800002-192808617 Lactuca sativa
Lsat_1_v5_gn_4_110600 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 192800002-192805001 Lactuca sativa
Lsat_1_v5_gn_4_110600 10.0kb upstream 10.0kb upstream 13616   true Lsat_1_v8_lg_4: 192805002-192818617 Lactuca sativa
Lsat_1_v5_gn_4_110600 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 192808618-192818617 Lactuca sativa
Lsat_1_v5_gn_4_110600 10.0kb downstream 10.0kb downstream 13616   true Lsat_1_v8_lg_4: 192795002-192808617 Lactuca sativa
Lsat_1_v5_gn_4_110600 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 192795002-192805001 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468368 5263 Asterids View MSA
123747795 5271 Pentapetalae View MSA
122795236 5272 Eudicot View MSA
122050456 5273 Angiosperm View MSA
121347252 5274 Embryophyte View MSA
123425862 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain