Gene : Lsat_1_v5_gn_4_110001 L. sativa V8
Defline:  (1 of 1) PTHR12565:SF165 - TRANSCRIPTION FACTOR PIF7 Genomic Order:  3166
Name:  ? Lsat_1_v5_gn_4_110001 Secondary Identifier:  ? PAC:38930340
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_110001 0.5kb upstream 0.5kb upstream 3026   true Lsat_1_v8_lg_4: 191397311-191400336 Lactuca sativa
Lsat_1_v5_gn_4_110001 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 191399837-191400336 Lactuca sativa
Lsat_1_v5_gn_4_110001 0.5kb downstream 0.5kb downstream 3026   true Lsat_1_v8_lg_4: 191396811-191399836 Lactuca sativa
Lsat_1_v5_gn_4_110001 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 191396811-191397310 Lactuca sativa
Lsat_1_v5_gn_4_110001 1.0kb upstream 1.0kb upstream 3526   true Lsat_1_v8_lg_4: 191397311-191400836 Lactuca sativa
Lsat_1_v5_gn_4_110001 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 191399837-191400836 Lactuca sativa
Lsat_1_v5_gn_4_110001 1.0kb downstream 1.0kb downstream 3526   true Lsat_1_v8_lg_4: 191396311-191399836 Lactuca sativa
Lsat_1_v5_gn_4_110001 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 191396311-191397310 Lactuca sativa
Lsat_1_v5_gn_4_110001 2.0kb upstream 2.0kb upstream 4526   true Lsat_1_v8_lg_4: 191397311-191401836 Lactuca sativa
Lsat_1_v5_gn_4_110001 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 191399837-191401836 Lactuca sativa
Lsat_1_v5_gn_4_110001 2.0kb downstream 2.0kb downstream 4526   true Lsat_1_v8_lg_4: 191395311-191399836 Lactuca sativa
Lsat_1_v5_gn_4_110001 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 191395311-191397310 Lactuca sativa
Lsat_1_v5_gn_4_110001 5.0kb upstream 5.0kb upstream 7526   true Lsat_1_v8_lg_4: 191397311-191404836 Lactuca sativa
Lsat_1_v5_gn_4_110001 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 191399837-191404836 Lactuca sativa
Lsat_1_v5_gn_4_110001 5.0kb downstream 5.0kb downstream 7526   true Lsat_1_v8_lg_4: 191392311-191399836 Lactuca sativa
Lsat_1_v5_gn_4_110001 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 191392311-191397310 Lactuca sativa
Lsat_1_v5_gn_4_110001 10.0kb upstream 10.0kb upstream 12526   true Lsat_1_v8_lg_4: 191397311-191409836 Lactuca sativa
Lsat_1_v5_gn_4_110001 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 191399837-191409836 Lactuca sativa
Lsat_1_v5_gn_4_110001 10.0kb downstream 10.0kb downstream 12526   true Lsat_1_v8_lg_4: 191387311-191399836 Lactuca sativa
Lsat_1_v5_gn_4_110001 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 191387311-191397310 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479451 5263 Asterids View MSA
123749282 5271 Pentapetalae View MSA
122787317 5272 Eudicot View MSA
122050189 5273 Angiosperm View MSA
121311789 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain