Gene : Lsat_1_v5_gn_4_111000 L. sativa V8
Defline:  (1 of 2) K11407 - histone deacetylase 6 (HDAC6) Genomic Order:  3190
Name:  ? Lsat_1_v5_gn_4_111000 Secondary Identifier:  ? PAC:38930349
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_111000 0.5kb upstream 0.5kb upstream 4258   true Lsat_1_v8_lg_4: 193057115-193061372 Lactuca sativa
Lsat_1_v5_gn_4_111000 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 193057115-193057614 Lactuca sativa
Lsat_1_v5_gn_4_111000 0.5kb downstream 0.5kb downstream 4258   true Lsat_1_v8_lg_4: 193057615-193061872 Lactuca sativa
Lsat_1_v5_gn_4_111000 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 193061373-193061872 Lactuca sativa
Lsat_1_v5_gn_4_111000 1.0kb upstream 1.0kb upstream 4758   true Lsat_1_v8_lg_4: 193056615-193061372 Lactuca sativa
Lsat_1_v5_gn_4_111000 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 193056615-193057614 Lactuca sativa
Lsat_1_v5_gn_4_111000 1.0kb downstream 1.0kb downstream 4758   true Lsat_1_v8_lg_4: 193057615-193062372 Lactuca sativa
Lsat_1_v5_gn_4_111000 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 193061373-193062372 Lactuca sativa
Lsat_1_v5_gn_4_111000 2.0kb upstream 2.0kb upstream 5758   true Lsat_1_v8_lg_4: 193055615-193061372 Lactuca sativa
Lsat_1_v5_gn_4_111000 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 193055615-193057614 Lactuca sativa
Lsat_1_v5_gn_4_111000 2.0kb downstream 2.0kb downstream 5758   true Lsat_1_v8_lg_4: 193057615-193063372 Lactuca sativa
Lsat_1_v5_gn_4_111000 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 193061373-193063372 Lactuca sativa
Lsat_1_v5_gn_4_111000 5.0kb upstream 5.0kb upstream 8758   true Lsat_1_v8_lg_4: 193052615-193061372 Lactuca sativa
Lsat_1_v5_gn_4_111000 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 193052615-193057614 Lactuca sativa
Lsat_1_v5_gn_4_111000 5.0kb downstream 5.0kb downstream 8758   true Lsat_1_v8_lg_4: 193057615-193066372 Lactuca sativa
Lsat_1_v5_gn_4_111000 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 193061373-193066372 Lactuca sativa
Lsat_1_v5_gn_4_111000 10.0kb upstream 10.0kb upstream 13758   true Lsat_1_v8_lg_4: 193047615-193061372 Lactuca sativa
Lsat_1_v5_gn_4_111000 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 193047615-193057614 Lactuca sativa
Lsat_1_v5_gn_4_111000 10.0kb downstream 10.0kb downstream 13758   true Lsat_1_v8_lg_4: 193057615-193071372 Lactuca sativa
Lsat_1_v5_gn_4_111000 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 193061373-193071372 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466908 5263 Asterids View MSA
123752884 5271 Pentapetalae View MSA
122793476 5272 Eudicot View MSA
122051091 5273 Angiosperm View MSA
121349302 5274 Embryophyte View MSA
123428156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain