Gene : Lsat_1_v5_gn_4_115280 L. sativa V8
Defline:  (1 of 5) PTHR11751//PTHR11751:SF387 - SUBGROUP I AMINOTRANSFERASE RELATED // AMINOTRANSFERASE TAT2-RELATED Genomic Order:  3300
Name:  ? Lsat_1_v5_gn_4_115280 Secondary Identifier:  ? PAC:38934406
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_115280 0.5kb upstream 0.5kb upstream 2189   true Lsat_1_v8_lg_4: 202952565-202954753 Lactuca sativa
Lsat_1_v5_gn_4_115280 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 202952565-202953064 Lactuca sativa
Lsat_1_v5_gn_4_115280 0.5kb downstream 0.5kb downstream 2189   true Lsat_1_v8_lg_4: 202953065-202955253 Lactuca sativa
Lsat_1_v5_gn_4_115280 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 202954754-202955253 Lactuca sativa
Lsat_1_v5_gn_4_115280 1.0kb upstream 1.0kb upstream 2689   true Lsat_1_v8_lg_4: 202952065-202954753 Lactuca sativa
Lsat_1_v5_gn_4_115280 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 202952065-202953064 Lactuca sativa
Lsat_1_v5_gn_4_115280 1.0kb downstream 1.0kb downstream 2689   true Lsat_1_v8_lg_4: 202953065-202955753 Lactuca sativa
Lsat_1_v5_gn_4_115280 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 202954754-202955753 Lactuca sativa
Lsat_1_v5_gn_4_115280 2.0kb upstream 2.0kb upstream 3689   true Lsat_1_v8_lg_4: 202951065-202954753 Lactuca sativa
Lsat_1_v5_gn_4_115280 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 202951065-202953064 Lactuca sativa
Lsat_1_v5_gn_4_115280 2.0kb downstream 2.0kb downstream 3689   true Lsat_1_v8_lg_4: 202953065-202956753 Lactuca sativa
Lsat_1_v5_gn_4_115280 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 202954754-202956753 Lactuca sativa
Lsat_1_v5_gn_4_115280 5.0kb upstream 5.0kb upstream 6689   true Lsat_1_v8_lg_4: 202948065-202954753 Lactuca sativa
Lsat_1_v5_gn_4_115280 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 202948065-202953064 Lactuca sativa
Lsat_1_v5_gn_4_115280 5.0kb downstream 5.0kb downstream 6689   true Lsat_1_v8_lg_4: 202953065-202959753 Lactuca sativa
Lsat_1_v5_gn_4_115280 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 202954754-202959753 Lactuca sativa
Lsat_1_v5_gn_4_115280 10.0kb upstream 10.0kb upstream 11689   true Lsat_1_v8_lg_4: 202943065-202954753 Lactuca sativa
Lsat_1_v5_gn_4_115280 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 202943065-202953064 Lactuca sativa
Lsat_1_v5_gn_4_115280 10.0kb downstream 10.0kb downstream 11689   true Lsat_1_v8_lg_4: 202953065-202964753 Lactuca sativa
Lsat_1_v5_gn_4_115280 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 202954754-202964753 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121444685 5263 Asterids Singleton cluster - no MSA
123748493 5271 Pentapetalae View MSA
122772656 5272 Eudicot View MSA
122051547 5273 Angiosperm View MSA
121351636 5274 Embryophyte View MSA
123426927 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain