Gene : Lsat_1_v5_gn_4_115701 L. sativa V8
Defline:  (1 of 1) PTHR10742:SF284 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A Genomic Order:  3305
Name:  ? Lsat_1_v5_gn_4_115701 Secondary Identifier:  ? PAC:38932243
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6441 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_115701 0.5kb upstream 0.5kb upstream 7475   true Lsat_1_v8_lg_4: 203390467-203397941 Lactuca sativa
Lsat_1_v5_gn_4_115701 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 203390467-203390966 Lactuca sativa
Lsat_1_v5_gn_4_115701 0.5kb downstream 0.5kb downstream 7475   true Lsat_1_v8_lg_4: 203390967-203398441 Lactuca sativa
Lsat_1_v5_gn_4_115701 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 203397942-203398441 Lactuca sativa
Lsat_1_v5_gn_4_115701 1.0kb upstream 1.0kb upstream 7975   true Lsat_1_v8_lg_4: 203389967-203397941 Lactuca sativa
Lsat_1_v5_gn_4_115701 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 203389967-203390966 Lactuca sativa
Lsat_1_v5_gn_4_115701 1.0kb downstream 1.0kb downstream 7975   true Lsat_1_v8_lg_4: 203390967-203398941 Lactuca sativa
Lsat_1_v5_gn_4_115701 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 203397942-203398941 Lactuca sativa
Lsat_1_v5_gn_4_115701 2.0kb upstream 2.0kb upstream 8975   true Lsat_1_v8_lg_4: 203388967-203397941 Lactuca sativa
Lsat_1_v5_gn_4_115701 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 203388967-203390966 Lactuca sativa
Lsat_1_v5_gn_4_115701 2.0kb downstream 2.0kb downstream 8975   true Lsat_1_v8_lg_4: 203390967-203399941 Lactuca sativa
Lsat_1_v5_gn_4_115701 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 203397942-203399941 Lactuca sativa
Lsat_1_v5_gn_4_115701 5.0kb upstream 5.0kb upstream 11975   true Lsat_1_v8_lg_4: 203385967-203397941 Lactuca sativa
Lsat_1_v5_gn_4_115701 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 203385967-203390966 Lactuca sativa
Lsat_1_v5_gn_4_115701 5.0kb downstream 5.0kb downstream 11975   true Lsat_1_v8_lg_4: 203390967-203402941 Lactuca sativa
Lsat_1_v5_gn_4_115701 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 203397942-203402941 Lactuca sativa
Lsat_1_v5_gn_4_115701 10.0kb upstream 10.0kb upstream 16975   true Lsat_1_v8_lg_4: 203380967-203397941 Lactuca sativa
Lsat_1_v5_gn_4_115701 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 203380967-203390966 Lactuca sativa
Lsat_1_v5_gn_4_115701 10.0kb downstream 10.0kb downstream 16975   true Lsat_1_v8_lg_4: 203390967-203407941 Lactuca sativa
Lsat_1_v5_gn_4_115701 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 203397942-203407941 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480883 5263 Asterids View MSA
123738203 5271 Pentapetalae View MSA
122790962 5272 Eudicot View MSA
122046463 5273 Angiosperm View MSA
121349079 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain