Gene : Lsat_1_v5_gn_4_117540 L. sativa V8
Defline:  (1 of 200) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  3386
Name:  ? Lsat_1_v5_gn_4_117540 Secondary Identifier:  ? PAC:38932744
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_117540 0.5kb upstream 0.5kb upstream 2412   true Lsat_1_v8_lg_4: 210504268-210506679 Lactuca sativa
Lsat_1_v5_gn_4_117540 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 210506180-210506679 Lactuca sativa
Lsat_1_v5_gn_4_117540 0.5kb downstream 0.5kb downstream 2412   true Lsat_1_v8_lg_4: 210503768-210506179 Lactuca sativa
Lsat_1_v5_gn_4_117540 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 210503768-210504267 Lactuca sativa
Lsat_1_v5_gn_4_117540 1.0kb upstream 1.0kb upstream 2912   true Lsat_1_v8_lg_4: 210504268-210507179 Lactuca sativa
Lsat_1_v5_gn_4_117540 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 210506180-210507179 Lactuca sativa
Lsat_1_v5_gn_4_117540 1.0kb downstream 1.0kb downstream 2912   true Lsat_1_v8_lg_4: 210503268-210506179 Lactuca sativa
Lsat_1_v5_gn_4_117540 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 210503268-210504267 Lactuca sativa
Lsat_1_v5_gn_4_117540 2.0kb upstream 2.0kb upstream 3912   true Lsat_1_v8_lg_4: 210504268-210508179 Lactuca sativa
Lsat_1_v5_gn_4_117540 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 210506180-210508179 Lactuca sativa
Lsat_1_v5_gn_4_117540 2.0kb downstream 2.0kb downstream 3912   true Lsat_1_v8_lg_4: 210502268-210506179 Lactuca sativa
Lsat_1_v5_gn_4_117540 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 210502268-210504267 Lactuca sativa
Lsat_1_v5_gn_4_117540 5.0kb upstream 5.0kb upstream 6912   true Lsat_1_v8_lg_4: 210504268-210511179 Lactuca sativa
Lsat_1_v5_gn_4_117540 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 210506180-210511179 Lactuca sativa
Lsat_1_v5_gn_4_117540 5.0kb downstream 5.0kb downstream 6912   true Lsat_1_v8_lg_4: 210499268-210506179 Lactuca sativa
Lsat_1_v5_gn_4_117540 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 210499268-210504267 Lactuca sativa
Lsat_1_v5_gn_4_117540 10.0kb upstream 10.0kb upstream 11912   true Lsat_1_v8_lg_4: 210504268-210516179 Lactuca sativa
Lsat_1_v5_gn_4_117540 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 210506180-210516179 Lactuca sativa
Lsat_1_v5_gn_4_117540 10.0kb downstream 10.0kb downstream 11912   true Lsat_1_v8_lg_4: 210494268-210506179 Lactuca sativa
Lsat_1_v5_gn_4_117540 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 210494268-210504267 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466420 5263 Asterids View MSA
123736487 5271 Pentapetalae View MSA
122788390 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain