Gene : Lsat_1_v5_gn_4_170081 L. sativa V8
Defline:  (1 of 2) 5.4.99.5 - Chorismate mutase / Hydroxyphenylpyruvate synthase Genomic Order:  4766
Name:  ? Lsat_1_v5_gn_4_170081 Secondary Identifier:  ? PAC:38931681
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-3461 Lactuca sativa pathologic  
Lsativa PWY-3462 Lactuca sativa pathologic  
Lsativa PWY-3481 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_170081 0.5kb upstream 0.5kb upstream 2165   true Lsat_1_v8_lg_4: 344549626-344551790 Lactuca sativa
Lsat_1_v5_gn_4_170081 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 344551291-344551790 Lactuca sativa
Lsat_1_v5_gn_4_170081 0.5kb downstream 0.5kb downstream 2165   true Lsat_1_v8_lg_4: 344549126-344551290 Lactuca sativa
Lsat_1_v5_gn_4_170081 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 344549126-344549625 Lactuca sativa
Lsat_1_v5_gn_4_170081 1.0kb upstream 1.0kb upstream 2665   true Lsat_1_v8_lg_4: 344549626-344552290 Lactuca sativa
Lsat_1_v5_gn_4_170081 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 344551291-344552290 Lactuca sativa
Lsat_1_v5_gn_4_170081 1.0kb downstream 1.0kb downstream 2665   true Lsat_1_v8_lg_4: 344548626-344551290 Lactuca sativa
Lsat_1_v5_gn_4_170081 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 344548626-344549625 Lactuca sativa
Lsat_1_v5_gn_4_170081 2.0kb upstream 2.0kb upstream 3665   true Lsat_1_v8_lg_4: 344549626-344553290 Lactuca sativa
Lsat_1_v5_gn_4_170081 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 344551291-344553290 Lactuca sativa
Lsat_1_v5_gn_4_170081 2.0kb downstream 2.0kb downstream 3665   true Lsat_1_v8_lg_4: 344547626-344551290 Lactuca sativa
Lsat_1_v5_gn_4_170081 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 344547626-344549625 Lactuca sativa
Lsat_1_v5_gn_4_170081 5.0kb upstream 5.0kb upstream 6665   true Lsat_1_v8_lg_4: 344549626-344556290 Lactuca sativa
Lsat_1_v5_gn_4_170081 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 344551291-344556290 Lactuca sativa
Lsat_1_v5_gn_4_170081 5.0kb downstream 5.0kb downstream 6665   true Lsat_1_v8_lg_4: 344544626-344551290 Lactuca sativa
Lsat_1_v5_gn_4_170081 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 344544626-344549625 Lactuca sativa
Lsat_1_v5_gn_4_170081 10.0kb upstream 10.0kb upstream 11665   true Lsat_1_v8_lg_4: 344549626-344561290 Lactuca sativa
Lsat_1_v5_gn_4_170081 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 344551291-344561290 Lactuca sativa
Lsat_1_v5_gn_4_170081 10.0kb downstream 10.0kb downstream 11665   true Lsat_1_v8_lg_4: 344539626-344551290 Lactuca sativa
Lsat_1_v5_gn_4_170081 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 344539626-344549625 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041201 5273 Angiosperm View MSA
121466710 5263 Asterids View MSA
123736644 5271 Pentapetalae View MSA
122792454 5272 Eudicot View MSA
121347234 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain