Gene : Lsat_1_v5_gn_4_170340 L. sativa V8
Defline:  (1 of 5) PTHR22811//PTHR22811:SF47 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN // EMP24/GP25L/P24 FAMILY/GOLD DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  4750
Name:  ? Lsat_1_v5_gn_4_170340 Secondary Identifier:  ? PAC:38935323
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_170340 0.5kb upstream 0.5kb upstream 1870   true Lsat_1_v8_lg_4: 343575697-343577566 Lactuca sativa
Lsat_1_v5_gn_4_170340 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 343575697-343576196 Lactuca sativa
Lsat_1_v5_gn_4_170340 0.5kb downstream 0.5kb downstream 1870   true Lsat_1_v8_lg_4: 343576197-343578066 Lactuca sativa
Lsat_1_v5_gn_4_170340 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 343577567-343578066 Lactuca sativa
Lsat_1_v5_gn_4_170340 1.0kb upstream 1.0kb upstream 2370   true Lsat_1_v8_lg_4: 343575197-343577566 Lactuca sativa
Lsat_1_v5_gn_4_170340 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 343575197-343576196 Lactuca sativa
Lsat_1_v5_gn_4_170340 1.0kb downstream 1.0kb downstream 2370   true Lsat_1_v8_lg_4: 343576197-343578566 Lactuca sativa
Lsat_1_v5_gn_4_170340 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 343577567-343578566 Lactuca sativa
Lsat_1_v5_gn_4_170340 2.0kb upstream 2.0kb upstream 3370   true Lsat_1_v8_lg_4: 343574197-343577566 Lactuca sativa
Lsat_1_v5_gn_4_170340 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 343574197-343576196 Lactuca sativa
Lsat_1_v5_gn_4_170340 2.0kb downstream 2.0kb downstream 3370   true Lsat_1_v8_lg_4: 343576197-343579566 Lactuca sativa
Lsat_1_v5_gn_4_170340 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 343577567-343579566 Lactuca sativa
Lsat_1_v5_gn_4_170340 5.0kb upstream 5.0kb upstream 6370   true Lsat_1_v8_lg_4: 343571197-343577566 Lactuca sativa
Lsat_1_v5_gn_4_170340 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 343571197-343576196 Lactuca sativa
Lsat_1_v5_gn_4_170340 5.0kb downstream 5.0kb downstream 6370   true Lsat_1_v8_lg_4: 343576197-343582566 Lactuca sativa
Lsat_1_v5_gn_4_170340 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 343577567-343582566 Lactuca sativa
Lsat_1_v5_gn_4_170340 10.0kb upstream 10.0kb upstream 11370   true Lsat_1_v8_lg_4: 343566197-343577566 Lactuca sativa
Lsat_1_v5_gn_4_170340 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 343566197-343576196 Lactuca sativa
Lsat_1_v5_gn_4_170340 10.0kb downstream 10.0kb downstream 11370   true Lsat_1_v8_lg_4: 343576197-343587566 Lactuca sativa
Lsat_1_v5_gn_4_170340 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 343577567-343587566 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121464997 5263 Asterids View MSA
123742196 5271 Pentapetalae View MSA
122791106 5272 Eudicot View MSA
122049810 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain