Gene : Lsat_1_v5_gn_4_172961 L. sativa V8

Defline:  (1 of 2) PTHR31636:SF13 - SCARECROW-LIKE PROTEIN 3 Genomic Order:  4854
Name:  ? Lsat_1_v5_gn_4_172961 Secondary Identifier:  ? PAC:38929566

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_172961 0.5kb upstream 0.5kb upstream 1778   true Lsat_1_v8_lg_4: 350911138-350912915 Lactuca sativa
Lsat_1_v5_gn_4_172961 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 350912416-350912915 Lactuca sativa
Lsat_1_v5_gn_4_172961 0.5kb downstream 0.5kb downstream 1778   true Lsat_1_v8_lg_4: 350910638-350912415 Lactuca sativa
Lsat_1_v5_gn_4_172961 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 350910638-350911137 Lactuca sativa
Lsat_1_v5_gn_4_172961 1.0kb upstream 1.0kb upstream 2278   true Lsat_1_v8_lg_4: 350911138-350913415 Lactuca sativa
Lsat_1_v5_gn_4_172961 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 350912416-350913415 Lactuca sativa
Lsat_1_v5_gn_4_172961 1.0kb downstream 1.0kb downstream 2278   true Lsat_1_v8_lg_4: 350910138-350912415 Lactuca sativa
Lsat_1_v5_gn_4_172961 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 350910138-350911137 Lactuca sativa
Lsat_1_v5_gn_4_172961 2.0kb upstream 2.0kb upstream 3278   true Lsat_1_v8_lg_4: 350911138-350914415 Lactuca sativa
Lsat_1_v5_gn_4_172961 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 350912416-350914415 Lactuca sativa
Lsat_1_v5_gn_4_172961 2.0kb downstream 2.0kb downstream 3278   true Lsat_1_v8_lg_4: 350909138-350912415 Lactuca sativa
Lsat_1_v5_gn_4_172961 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 350909138-350911137 Lactuca sativa
Lsat_1_v5_gn_4_172961 5.0kb upstream 5.0kb upstream 6278   true Lsat_1_v8_lg_4: 350911138-350917415 Lactuca sativa
Lsat_1_v5_gn_4_172961 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 350912416-350917415 Lactuca sativa
Lsat_1_v5_gn_4_172961 5.0kb downstream 5.0kb downstream 6278   true Lsat_1_v8_lg_4: 350906138-350912415 Lactuca sativa
Lsat_1_v5_gn_4_172961 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 350906138-350911137 Lactuca sativa
Lsat_1_v5_gn_4_172961 10.0kb upstream 10.0kb upstream 11278   true Lsat_1_v8_lg_4: 350911138-350922415 Lactuca sativa
Lsat_1_v5_gn_4_172961 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 350912416-350922415 Lactuca sativa
Lsat_1_v5_gn_4_172961 10.0kb downstream 10.0kb downstream 11278   true Lsat_1_v8_lg_4: 350901138-350912415 Lactuca sativa
Lsat_1_v5_gn_4_172961 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 350901138-350911137 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780166 5273 Angiosperm View MSA
121473175 5263 Asterids View MSA
123745334 5271 Pentapetalae View MSA
122771460 5272 Eudicot View MSA
121051790 5274 Embryophyte View MSA
123091864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain