Gene : Lsat_1_v5_gn_4_171761 L. sativa V8
Defline:  (1 of 4) PF16136 - Putative nuclear localisation signal (NINJA_B) Genomic Order:  4821
Name:  ? Lsat_1_v5_gn_4_171761 Secondary Identifier:  ? PAC:38928985
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_171761 0.5kb upstream 0.5kb upstream 3270   true Lsat_1_v8_lg_4: 348791676-348794945 Lactuca sativa
Lsat_1_v5_gn_4_171761 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 348794446-348794945 Lactuca sativa
Lsat_1_v5_gn_4_171761 0.5kb downstream 0.5kb downstream 3270   true Lsat_1_v8_lg_4: 348791176-348794445 Lactuca sativa
Lsat_1_v5_gn_4_171761 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 348791176-348791675 Lactuca sativa
Lsat_1_v5_gn_4_171761 1.0kb upstream 1.0kb upstream 3770   true Lsat_1_v8_lg_4: 348791676-348795445 Lactuca sativa
Lsat_1_v5_gn_4_171761 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 348794446-348795445 Lactuca sativa
Lsat_1_v5_gn_4_171761 1.0kb downstream 1.0kb downstream 3770   true Lsat_1_v8_lg_4: 348790676-348794445 Lactuca sativa
Lsat_1_v5_gn_4_171761 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 348790676-348791675 Lactuca sativa
Lsat_1_v5_gn_4_171761 2.0kb upstream 2.0kb upstream 4770   true Lsat_1_v8_lg_4: 348791676-348796445 Lactuca sativa
Lsat_1_v5_gn_4_171761 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 348794446-348796445 Lactuca sativa
Lsat_1_v5_gn_4_171761 2.0kb downstream 2.0kb downstream 4770   true Lsat_1_v8_lg_4: 348789676-348794445 Lactuca sativa
Lsat_1_v5_gn_4_171761 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 348789676-348791675 Lactuca sativa
Lsat_1_v5_gn_4_171761 5.0kb upstream 5.0kb upstream 7770   true Lsat_1_v8_lg_4: 348791676-348799445 Lactuca sativa
Lsat_1_v5_gn_4_171761 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 348794446-348799445 Lactuca sativa
Lsat_1_v5_gn_4_171761 5.0kb downstream 5.0kb downstream 7770   true Lsat_1_v8_lg_4: 348786676-348794445 Lactuca sativa
Lsat_1_v5_gn_4_171761 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 348786676-348791675 Lactuca sativa
Lsat_1_v5_gn_4_171761 10.0kb upstream 10.0kb upstream 12770   true Lsat_1_v8_lg_4: 348791676-348804445 Lactuca sativa
Lsat_1_v5_gn_4_171761 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 348794446-348804445 Lactuca sativa
Lsat_1_v5_gn_4_171761 10.0kb downstream 10.0kb downstream 12770   true Lsat_1_v8_lg_4: 348781676-348794445 Lactuca sativa
Lsat_1_v5_gn_4_171761 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 348781676-348791675 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478455 5263 Asterids View MSA
123753389 5271 Pentapetalae View MSA
122792096 5272 Eudicot View MSA
122050177 5273 Angiosperm View MSA
121311781 5274 Embryophyte View MSA
123349031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain