Gene : Lsat_1_v5_gn_4_173280 L. sativa V8
Defline:  (1 of 1) PTHR33417//PTHR33417:SF1 - FAMILY NOT NAMED // B12D PROTEIN Genomic Order:  4849
Name:  ? Lsat_1_v5_gn_4_173280 Secondary Identifier:  ? PAC:38931579
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_173280 0.5kb upstream 0.5kb upstream 1515   true Lsat_1_v8_lg_4: 350695286-350696800 Lactuca sativa
Lsat_1_v5_gn_4_173280 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 350695286-350695785 Lactuca sativa
Lsat_1_v5_gn_4_173280 0.5kb downstream 0.5kb downstream 1515   true Lsat_1_v8_lg_4: 350695786-350697300 Lactuca sativa
Lsat_1_v5_gn_4_173280 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 350696801-350697300 Lactuca sativa
Lsat_1_v5_gn_4_173280 1.0kb upstream 1.0kb upstream 2015   true Lsat_1_v8_lg_4: 350694786-350696800 Lactuca sativa
Lsat_1_v5_gn_4_173280 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 350694786-350695785 Lactuca sativa
Lsat_1_v5_gn_4_173280 1.0kb downstream 1.0kb downstream 2015   true Lsat_1_v8_lg_4: 350695786-350697800 Lactuca sativa
Lsat_1_v5_gn_4_173280 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 350696801-350697800 Lactuca sativa
Lsat_1_v5_gn_4_173280 2.0kb upstream 2.0kb upstream 3015   true Lsat_1_v8_lg_4: 350693786-350696800 Lactuca sativa
Lsat_1_v5_gn_4_173280 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 350693786-350695785 Lactuca sativa
Lsat_1_v5_gn_4_173280 2.0kb downstream 2.0kb downstream 3015   true Lsat_1_v8_lg_4: 350695786-350698800 Lactuca sativa
Lsat_1_v5_gn_4_173280 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 350696801-350698800 Lactuca sativa
Lsat_1_v5_gn_4_173280 5.0kb upstream 5.0kb upstream 6015   true Lsat_1_v8_lg_4: 350690786-350696800 Lactuca sativa
Lsat_1_v5_gn_4_173280 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 350690786-350695785 Lactuca sativa
Lsat_1_v5_gn_4_173280 5.0kb downstream 5.0kb downstream 6015   true Lsat_1_v8_lg_4: 350695786-350701800 Lactuca sativa
Lsat_1_v5_gn_4_173280 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 350696801-350701800 Lactuca sativa
Lsat_1_v5_gn_4_173280 10.0kb upstream 10.0kb upstream 11015   true Lsat_1_v8_lg_4: 350685786-350696800 Lactuca sativa
Lsat_1_v5_gn_4_173280 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 350685786-350695785 Lactuca sativa
Lsat_1_v5_gn_4_173280 10.0kb downstream 10.0kb downstream 11015   true Lsat_1_v8_lg_4: 350695786-350706800 Lactuca sativa
Lsat_1_v5_gn_4_173280 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 350696801-350706800 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480036 5263 Asterids View MSA
123738615 5271 Pentapetalae View MSA
122769927 5272 Eudicot View MSA
122048114 5273 Angiosperm View MSA
121310851 5274 Embryophyte View MSA
123348236 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain