Gene : Lsat_1_v5_gn_4_177360 L. sativa V8
Defline:  (1 of 26) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  4959
Name:  ? Lsat_1_v5_gn_4_177360 Secondary Identifier:  ? PAC:38933484
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_177360 0.5kb upstream 0.5kb upstream 4046   true Lsat_1_v8_lg_4: 361500896-361504941 Lactuca sativa
Lsat_1_v5_gn_4_177360 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 361500896-361501395 Lactuca sativa
Lsat_1_v5_gn_4_177360 0.5kb downstream 0.5kb downstream 4046   true Lsat_1_v8_lg_4: 361501396-361505441 Lactuca sativa
Lsat_1_v5_gn_4_177360 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 361504942-361505441 Lactuca sativa
Lsat_1_v5_gn_4_177360 1.0kb upstream 1.0kb upstream 4546   true Lsat_1_v8_lg_4: 361500396-361504941 Lactuca sativa
Lsat_1_v5_gn_4_177360 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 361500396-361501395 Lactuca sativa
Lsat_1_v5_gn_4_177360 1.0kb downstream 1.0kb downstream 4546   true Lsat_1_v8_lg_4: 361501396-361505941 Lactuca sativa
Lsat_1_v5_gn_4_177360 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 361504942-361505941 Lactuca sativa
Lsat_1_v5_gn_4_177360 2.0kb upstream 2.0kb upstream 5546   true Lsat_1_v8_lg_4: 361499396-361504941 Lactuca sativa
Lsat_1_v5_gn_4_177360 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 361499396-361501395 Lactuca sativa
Lsat_1_v5_gn_4_177360 2.0kb downstream 2.0kb downstream 5546   true Lsat_1_v8_lg_4: 361501396-361506941 Lactuca sativa
Lsat_1_v5_gn_4_177360 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 361504942-361506941 Lactuca sativa
Lsat_1_v5_gn_4_177360 5.0kb upstream 5.0kb upstream 8546   true Lsat_1_v8_lg_4: 361496396-361504941 Lactuca sativa
Lsat_1_v5_gn_4_177360 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 361496396-361501395 Lactuca sativa
Lsat_1_v5_gn_4_177360 5.0kb downstream 5.0kb downstream 8546   true Lsat_1_v8_lg_4: 361501396-361509941 Lactuca sativa
Lsat_1_v5_gn_4_177360 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 361504942-361509941 Lactuca sativa
Lsat_1_v5_gn_4_177360 10.0kb upstream 10.0kb upstream 13546   true Lsat_1_v8_lg_4: 361491396-361504941 Lactuca sativa
Lsat_1_v5_gn_4_177360 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 361491396-361501395 Lactuca sativa
Lsat_1_v5_gn_4_177360 10.0kb downstream 10.0kb downstream 13546   true Lsat_1_v8_lg_4: 361501396-361514941 Lactuca sativa
Lsat_1_v5_gn_4_177360 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 361504942-361514941 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469948 5263 Asterids View MSA
123740597 5271 Pentapetalae View MSA
122793166 5272 Eudicot View MSA
122048903 5273 Angiosperm View MSA
121311163 5274 Embryophyte View MSA
123348497 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain