Gene : Lsat_1_v5_gn_4_179580 L. sativa V8
Defline:  (1 of 1) K14950 - cation-transporting ATPase 13A1 (ATP13A1) Genomic Order:  4980
Name:  ? Lsat_1_v5_gn_4_179580 Secondary Identifier:  ? PAC:38930022
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_179580 0.5kb upstream 0.5kb upstream 7562   true Lsat_1_v8_lg_4: 363404906-363412467 Lactuca sativa
Lsat_1_v5_gn_4_179580 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 363411968-363412467 Lactuca sativa
Lsat_1_v5_gn_4_179580 0.5kb downstream 0.5kb downstream 7562   true Lsat_1_v8_lg_4: 363404406-363411967 Lactuca sativa
Lsat_1_v5_gn_4_179580 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 363404406-363404905 Lactuca sativa
Lsat_1_v5_gn_4_179580 1.0kb upstream 1.0kb upstream 8062   true Lsat_1_v8_lg_4: 363404906-363412967 Lactuca sativa
Lsat_1_v5_gn_4_179580 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 363411968-363412967 Lactuca sativa
Lsat_1_v5_gn_4_179580 1.0kb downstream 1.0kb downstream 8062   true Lsat_1_v8_lg_4: 363403906-363411967 Lactuca sativa
Lsat_1_v5_gn_4_179580 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 363403906-363404905 Lactuca sativa
Lsat_1_v5_gn_4_179580 2.0kb upstream 2.0kb upstream 9062   true Lsat_1_v8_lg_4: 363404906-363413967 Lactuca sativa
Lsat_1_v5_gn_4_179580 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 363411968-363413967 Lactuca sativa
Lsat_1_v5_gn_4_179580 2.0kb downstream 2.0kb downstream 9062   true Lsat_1_v8_lg_4: 363402906-363411967 Lactuca sativa
Lsat_1_v5_gn_4_179580 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 363402906-363404905 Lactuca sativa
Lsat_1_v5_gn_4_179580 5.0kb upstream 5.0kb upstream 12062   true Lsat_1_v8_lg_4: 363404906-363416967 Lactuca sativa
Lsat_1_v5_gn_4_179580 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 363411968-363416967 Lactuca sativa
Lsat_1_v5_gn_4_179580 5.0kb downstream 5.0kb downstream 12062   true Lsat_1_v8_lg_4: 363399906-363411967 Lactuca sativa
Lsat_1_v5_gn_4_179580 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 363399906-363404905 Lactuca sativa
Lsat_1_v5_gn_4_179580 10.0kb upstream 10.0kb upstream 17062   true Lsat_1_v8_lg_4: 363404906-363421967 Lactuca sativa
Lsat_1_v5_gn_4_179580 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 363411968-363421967 Lactuca sativa
Lsat_1_v5_gn_4_179580 10.0kb downstream 10.0kb downstream 17062   true Lsat_1_v8_lg_4: 363394906-363411967 Lactuca sativa
Lsat_1_v5_gn_4_179580 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 363394906-363404905 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026494 5273 Angiosperm View MSA
121472558 5263 Asterids View MSA
123739596 5271 Pentapetalae View MSA
122790607 5272 Eudicot View MSA
121344570 5274 Embryophyte View MSA
123424459 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain