Gene : Lsat_1_v5_gn_4_179941 L. sativa V8
Defline:  (1 of 2) K13024 - inositol hexakisphosphate/diphosphoinositol-pentakisphosphate kinase (HISPPD, VIP) Genomic Order:  5032
Name:  ? Lsat_1_v5_gn_4_179941 Secondary Identifier:  ? PAC:38933610
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6369 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_179941 0.5kb upstream 0.5kb upstream 9556   true Lsat_1_v8_lg_4: 367314487-367324042 Lactuca sativa
Lsat_1_v5_gn_4_179941 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 367314487-367314986 Lactuca sativa
Lsat_1_v5_gn_4_179941 0.5kb downstream 0.5kb downstream 9556   true Lsat_1_v8_lg_4: 367314987-367324542 Lactuca sativa
Lsat_1_v5_gn_4_179941 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 367324043-367324542 Lactuca sativa
Lsat_1_v5_gn_4_179941 1.0kb upstream 1.0kb upstream 10056   true Lsat_1_v8_lg_4: 367313987-367324042 Lactuca sativa
Lsat_1_v5_gn_4_179941 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 367313987-367314986 Lactuca sativa
Lsat_1_v5_gn_4_179941 1.0kb downstream 1.0kb downstream 10056   true Lsat_1_v8_lg_4: 367314987-367325042 Lactuca sativa
Lsat_1_v5_gn_4_179941 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 367324043-367325042 Lactuca sativa
Lsat_1_v5_gn_4_179941 2.0kb upstream 2.0kb upstream 11056   true Lsat_1_v8_lg_4: 367312987-367324042 Lactuca sativa
Lsat_1_v5_gn_4_179941 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 367312987-367314986 Lactuca sativa
Lsat_1_v5_gn_4_179941 2.0kb downstream 2.0kb downstream 11056   true Lsat_1_v8_lg_4: 367314987-367326042 Lactuca sativa
Lsat_1_v5_gn_4_179941 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 367324043-367326042 Lactuca sativa
Lsat_1_v5_gn_4_179941 5.0kb upstream 5.0kb upstream 14056   true Lsat_1_v8_lg_4: 367309987-367324042 Lactuca sativa
Lsat_1_v5_gn_4_179941 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 367309987-367314986 Lactuca sativa
Lsat_1_v5_gn_4_179941 5.0kb downstream 5.0kb downstream 14056   true Lsat_1_v8_lg_4: 367314987-367329042 Lactuca sativa
Lsat_1_v5_gn_4_179941 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 367324043-367329042 Lactuca sativa
Lsat_1_v5_gn_4_179941 10.0kb upstream 10.0kb upstream 19056   true Lsat_1_v8_lg_4: 367304987-367324042 Lactuca sativa
Lsat_1_v5_gn_4_179941 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 367304987-367314986 Lactuca sativa
Lsat_1_v5_gn_4_179941 10.0kb downstream 10.0kb downstream 19056   true Lsat_1_v8_lg_4: 367314987-367334042 Lactuca sativa
Lsat_1_v5_gn_4_179941 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 367324043-367334042 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476795 5263 Asterids View MSA
123745531 5271 Pentapetalae View MSA
122790290 5272 Eudicot View MSA
122041984 5273 Angiosperm View MSA
121345196 5274 Embryophyte View MSA
123427581 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain