Gene : Lsat_1_v5_gn_4_180280 L. sativa V8
Defline:  (1 of 1) 2.1.1.171 - 16S rRNA (guanine(966)-N(2))-methyltransferase / M(2)G966 methyltransferase Genomic Order:  5040
Name:  ? Lsat_1_v5_gn_4_180280 Secondary Identifier:  ? PAC:38929850
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_180280 0.5kb upstream 0.5kb upstream 4586   true Lsat_1_v8_lg_4: 367988192-367992777 Lactuca sativa
Lsat_1_v5_gn_4_180280 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 367988192-367988691 Lactuca sativa
Lsat_1_v5_gn_4_180280 0.5kb downstream 0.5kb downstream 4586   true Lsat_1_v8_lg_4: 367988692-367993277 Lactuca sativa
Lsat_1_v5_gn_4_180280 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 367992778-367993277 Lactuca sativa
Lsat_1_v5_gn_4_180280 1.0kb upstream 1.0kb upstream 5086   true Lsat_1_v8_lg_4: 367987692-367992777 Lactuca sativa
Lsat_1_v5_gn_4_180280 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 367987692-367988691 Lactuca sativa
Lsat_1_v5_gn_4_180280 1.0kb downstream 1.0kb downstream 5086   true Lsat_1_v8_lg_4: 367988692-367993777 Lactuca sativa
Lsat_1_v5_gn_4_180280 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 367992778-367993777 Lactuca sativa
Lsat_1_v5_gn_4_180280 2.0kb upstream 2.0kb upstream 6086   true Lsat_1_v8_lg_4: 367986692-367992777 Lactuca sativa
Lsat_1_v5_gn_4_180280 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 367986692-367988691 Lactuca sativa
Lsat_1_v5_gn_4_180280 2.0kb downstream 2.0kb downstream 6086   true Lsat_1_v8_lg_4: 367988692-367994777 Lactuca sativa
Lsat_1_v5_gn_4_180280 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 367992778-367994777 Lactuca sativa
Lsat_1_v5_gn_4_180280 5.0kb upstream 5.0kb upstream 9086   true Lsat_1_v8_lg_4: 367983692-367992777 Lactuca sativa
Lsat_1_v5_gn_4_180280 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 367983692-367988691 Lactuca sativa
Lsat_1_v5_gn_4_180280 5.0kb downstream 5.0kb downstream 9086   true Lsat_1_v8_lg_4: 367988692-367997777 Lactuca sativa
Lsat_1_v5_gn_4_180280 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 367992778-367997777 Lactuca sativa
Lsat_1_v5_gn_4_180280 10.0kb upstream 10.0kb upstream 14086   true Lsat_1_v8_lg_4: 367978692-367992777 Lactuca sativa
Lsat_1_v5_gn_4_180280 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 367978692-367988691 Lactuca sativa
Lsat_1_v5_gn_4_180280 10.0kb downstream 10.0kb downstream 14086   true Lsat_1_v8_lg_4: 367988692-368002777 Lactuca sativa
Lsat_1_v5_gn_4_180280 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 367992778-368002777 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470088 5263 Asterids View MSA
123738350 5271 Pentapetalae View MSA
122790005 5272 Eudicot View MSA
122044279 5273 Angiosperm View MSA
121347600 5274 Embryophyte View MSA
123423855 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain