Gene : Lsat_1_v5_gn_4_182500 L. sativa V8
Defline:  (1 of 2) PTHR22939:SF81 - PROTEASE DO-LIKE 1, CHLOROPLASTIC Genomic Order:  5107
Name:  ? Lsat_1_v5_gn_4_182500 Secondary Identifier:  ? PAC:38931427
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_182500 0.5kb upstream 0.5kb upstream 3664   true Lsat_1_v8_lg_4: 370699078-370702741 Lactuca sativa
Lsat_1_v5_gn_4_182500 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 370699078-370699577 Lactuca sativa
Lsat_1_v5_gn_4_182500 0.5kb downstream 0.5kb downstream 3664   true Lsat_1_v8_lg_4: 370699578-370703241 Lactuca sativa
Lsat_1_v5_gn_4_182500 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 370702742-370703241 Lactuca sativa
Lsat_1_v5_gn_4_182500 1.0kb upstream 1.0kb upstream 4164   true Lsat_1_v8_lg_4: 370698578-370702741 Lactuca sativa
Lsat_1_v5_gn_4_182500 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 370698578-370699577 Lactuca sativa
Lsat_1_v5_gn_4_182500 1.0kb downstream 1.0kb downstream 4164   true Lsat_1_v8_lg_4: 370699578-370703741 Lactuca sativa
Lsat_1_v5_gn_4_182500 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 370702742-370703741 Lactuca sativa
Lsat_1_v5_gn_4_182500 2.0kb upstream 2.0kb upstream 5164   true Lsat_1_v8_lg_4: 370697578-370702741 Lactuca sativa
Lsat_1_v5_gn_4_182500 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 370697578-370699577 Lactuca sativa
Lsat_1_v5_gn_4_182500 2.0kb downstream 2.0kb downstream 5164   true Lsat_1_v8_lg_4: 370699578-370704741 Lactuca sativa
Lsat_1_v5_gn_4_182500 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 370702742-370704741 Lactuca sativa
Lsat_1_v5_gn_4_182500 5.0kb upstream 5.0kb upstream 8164   true Lsat_1_v8_lg_4: 370694578-370702741 Lactuca sativa
Lsat_1_v5_gn_4_182500 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 370694578-370699577 Lactuca sativa
Lsat_1_v5_gn_4_182500 5.0kb downstream 5.0kb downstream 8164   true Lsat_1_v8_lg_4: 370699578-370707741 Lactuca sativa
Lsat_1_v5_gn_4_182500 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 370702742-370707741 Lactuca sativa
Lsat_1_v5_gn_4_182500 10.0kb upstream 10.0kb upstream 13164   true Lsat_1_v8_lg_4: 370689578-370702741 Lactuca sativa
Lsat_1_v5_gn_4_182500 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 370689578-370699577 Lactuca sativa
Lsat_1_v5_gn_4_182500 10.0kb downstream 10.0kb downstream 13164   true Lsat_1_v8_lg_4: 370699578-370712741 Lactuca sativa
Lsat_1_v5_gn_4_182500 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 370702742-370712741 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468811 5263 Asterids View MSA
123737720 5271 Pentapetalae View MSA
122794444 5272 Eudicot View MSA
122046956 5273 Angiosperm View MSA
121350502 5274 Embryophyte View MSA
123427247 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain