Gene : Lsat_1_v5_gn_4_181561 L. sativa V8
Defline:  (1 of 5) PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Genomic Order:  5079
Name:  ? Lsat_1_v5_gn_4_181561 Secondary Identifier:  ? PAC:38933314
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_181561 0.5kb upstream 0.5kb upstream 2235   true Lsat_1_v8_lg_4: 369462923-369465157 Lactuca sativa
Lsat_1_v5_gn_4_181561 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 369462923-369463422 Lactuca sativa
Lsat_1_v5_gn_4_181561 0.5kb downstream 0.5kb downstream 2235   true Lsat_1_v8_lg_4: 369463423-369465657 Lactuca sativa
Lsat_1_v5_gn_4_181561 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 369465158-369465657 Lactuca sativa
Lsat_1_v5_gn_4_181561 1.0kb upstream 1.0kb upstream 2735   true Lsat_1_v8_lg_4: 369462423-369465157 Lactuca sativa
Lsat_1_v5_gn_4_181561 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 369462423-369463422 Lactuca sativa
Lsat_1_v5_gn_4_181561 1.0kb downstream 1.0kb downstream 2735   true Lsat_1_v8_lg_4: 369463423-369466157 Lactuca sativa
Lsat_1_v5_gn_4_181561 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 369465158-369466157 Lactuca sativa
Lsat_1_v5_gn_4_181561 2.0kb upstream 2.0kb upstream 3735   true Lsat_1_v8_lg_4: 369461423-369465157 Lactuca sativa
Lsat_1_v5_gn_4_181561 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 369461423-369463422 Lactuca sativa
Lsat_1_v5_gn_4_181561 2.0kb downstream 2.0kb downstream 3735   true Lsat_1_v8_lg_4: 369463423-369467157 Lactuca sativa
Lsat_1_v5_gn_4_181561 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 369465158-369467157 Lactuca sativa
Lsat_1_v5_gn_4_181561 5.0kb upstream 5.0kb upstream 6735   true Lsat_1_v8_lg_4: 369458423-369465157 Lactuca sativa
Lsat_1_v5_gn_4_181561 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 369458423-369463422 Lactuca sativa
Lsat_1_v5_gn_4_181561 5.0kb downstream 5.0kb downstream 6735   true Lsat_1_v8_lg_4: 369463423-369470157 Lactuca sativa
Lsat_1_v5_gn_4_181561 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 369465158-369470157 Lactuca sativa
Lsat_1_v5_gn_4_181561 10.0kb upstream 10.0kb upstream 11735   true Lsat_1_v8_lg_4: 369453423-369465157 Lactuca sativa
Lsat_1_v5_gn_4_181561 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 369453423-369463422 Lactuca sativa
Lsat_1_v5_gn_4_181561 10.0kb downstream 10.0kb downstream 11735   true Lsat_1_v8_lg_4: 369463423-369475157 Lactuca sativa
Lsat_1_v5_gn_4_181561 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 369465158-369475157 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041020 5273 Angiosperm View MSA
121475202 5263 Asterids View MSA
123752396 5271 Pentapetalae View MSA
122790664 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain