Gene : Lsat_1_v5_gn_4_181601 L. sativa V8
Defline:  (1 of 1) PTHR12297 - HYPOXIA-INDUCBILE GENE 1 HIG1 -RELATED Genomic Order:  5077
Name:  ? Lsat_1_v5_gn_4_181601 Secondary Identifier:  ? PAC:38935135
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_181601 0.5kb upstream 0.5kb upstream 1665   true Lsat_1_v8_lg_4: 369449395-369451059 Lactuca sativa
Lsat_1_v5_gn_4_181601 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 369449395-369449894 Lactuca sativa
Lsat_1_v5_gn_4_181601 0.5kb downstream 0.5kb downstream 1665   true Lsat_1_v8_lg_4: 369449895-369451559 Lactuca sativa
Lsat_1_v5_gn_4_181601 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 369451060-369451559 Lactuca sativa
Lsat_1_v5_gn_4_181601 1.0kb upstream 1.0kb upstream 2165   true Lsat_1_v8_lg_4: 369448895-369451059 Lactuca sativa
Lsat_1_v5_gn_4_181601 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 369448895-369449894 Lactuca sativa
Lsat_1_v5_gn_4_181601 1.0kb downstream 1.0kb downstream 2165   true Lsat_1_v8_lg_4: 369449895-369452059 Lactuca sativa
Lsat_1_v5_gn_4_181601 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 369451060-369452059 Lactuca sativa
Lsat_1_v5_gn_4_181601 2.0kb upstream 2.0kb upstream 3165   true Lsat_1_v8_lg_4: 369447895-369451059 Lactuca sativa
Lsat_1_v5_gn_4_181601 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 369447895-369449894 Lactuca sativa
Lsat_1_v5_gn_4_181601 2.0kb downstream 2.0kb downstream 3165   true Lsat_1_v8_lg_4: 369449895-369453059 Lactuca sativa
Lsat_1_v5_gn_4_181601 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 369451060-369453059 Lactuca sativa
Lsat_1_v5_gn_4_181601 5.0kb upstream 5.0kb upstream 6165   true Lsat_1_v8_lg_4: 369444895-369451059 Lactuca sativa
Lsat_1_v5_gn_4_181601 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 369444895-369449894 Lactuca sativa
Lsat_1_v5_gn_4_181601 5.0kb downstream 5.0kb downstream 6165   true Lsat_1_v8_lg_4: 369449895-369456059 Lactuca sativa
Lsat_1_v5_gn_4_181601 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 369451060-369456059 Lactuca sativa
Lsat_1_v5_gn_4_181601 10.0kb upstream 10.0kb upstream 11165   true Lsat_1_v8_lg_4: 369439895-369451059 Lactuca sativa
Lsat_1_v5_gn_4_181601 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 369439895-369449894 Lactuca sativa
Lsat_1_v5_gn_4_181601 10.0kb downstream 10.0kb downstream 11165   true Lsat_1_v8_lg_4: 369449895-369461059 Lactuca sativa
Lsat_1_v5_gn_4_181601 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 369451060-369461059 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473853 5263 Asterids View MSA
123750302 5271 Pentapetalae View MSA
122790917 5272 Eudicot View MSA
122045148 5273 Angiosperm View MSA
121347874 5274 Embryophyte View MSA
123423754 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain