Gene : Lsat_1_v5_gn_4_185401 L. sativa V8
Defline:  (1 of 1) PTHR10742//PTHR10742:SF229 - AMINE OXIDASE // PROTOPORPHYRINOGEN OXIDASE 2, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  5213
Name:  ? Lsat_1_v5_gn_4_185401 Secondary Identifier:  ? PAC:38935013
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa CHLOROPHYLL-SYN Lactuca sativa pathologic  
Lsativa HEME-BIOSYNTHESIS-II Lactuca sativa pathologic  
Lsativa PWY-5918 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_185401 0.5kb upstream 0.5kb upstream 5255   true Lsat_1_v8_lg_4: 375236805-375242059 Lactuca sativa
Lsat_1_v5_gn_4_185401 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 375236805-375237304 Lactuca sativa
Lsat_1_v5_gn_4_185401 0.5kb downstream 0.5kb downstream 5255   true Lsat_1_v8_lg_4: 375237305-375242559 Lactuca sativa
Lsat_1_v5_gn_4_185401 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 375242060-375242559 Lactuca sativa
Lsat_1_v5_gn_4_185401 1.0kb upstream 1.0kb upstream 5755   true Lsat_1_v8_lg_4: 375236305-375242059 Lactuca sativa
Lsat_1_v5_gn_4_185401 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 375236305-375237304 Lactuca sativa
Lsat_1_v5_gn_4_185401 1.0kb downstream 1.0kb downstream 5755   true Lsat_1_v8_lg_4: 375237305-375243059 Lactuca sativa
Lsat_1_v5_gn_4_185401 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 375242060-375243059 Lactuca sativa
Lsat_1_v5_gn_4_185401 2.0kb upstream 2.0kb upstream 6755   true Lsat_1_v8_lg_4: 375235305-375242059 Lactuca sativa
Lsat_1_v5_gn_4_185401 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 375235305-375237304 Lactuca sativa
Lsat_1_v5_gn_4_185401 2.0kb downstream 2.0kb downstream 6755   true Lsat_1_v8_lg_4: 375237305-375244059 Lactuca sativa
Lsat_1_v5_gn_4_185401 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 375242060-375244059 Lactuca sativa
Lsat_1_v5_gn_4_185401 5.0kb upstream 5.0kb upstream 9755   true Lsat_1_v8_lg_4: 375232305-375242059 Lactuca sativa
Lsat_1_v5_gn_4_185401 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 375232305-375237304 Lactuca sativa
Lsat_1_v5_gn_4_185401 5.0kb downstream 5.0kb downstream 9755   true Lsat_1_v8_lg_4: 375237305-375247059 Lactuca sativa
Lsat_1_v5_gn_4_185401 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 375242060-375247059 Lactuca sativa
Lsat_1_v5_gn_4_185401 10.0kb upstream 10.0kb upstream 14755   true Lsat_1_v8_lg_4: 375227305-375242059 Lactuca sativa
Lsat_1_v5_gn_4_185401 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 375227305-375237304 Lactuca sativa
Lsat_1_v5_gn_4_185401 10.0kb downstream 10.0kb downstream 14755   true Lsat_1_v8_lg_4: 375237305-375252059 Lactuca sativa
Lsat_1_v5_gn_4_185401 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 375242060-375252059 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471772 5263 Asterids View MSA
123747490 5271 Pentapetalae View MSA
122787686 5272 Eudicot View MSA
122041725 5273 Angiosperm View MSA
121347394 5274 Embryophyte View MSA
123424000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain