Gene : Lsat_1_v5_gn_4_18960 L. sativa V8
Defline:  (1 of 6) KOG2881 - Predicted membrane protein Genomic Order:  514
Name:  ? Lsat_1_v5_gn_4_18960 Secondary Identifier:  ? PAC:38928446
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_18960 0.5kb upstream 0.5kb upstream 3950   true Lsat_1_v8_lg_4: 26466844-26470793 Lactuca sativa
Lsat_1_v5_gn_4_18960 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 26466844-26467343 Lactuca sativa
Lsat_1_v5_gn_4_18960 0.5kb downstream 0.5kb downstream 3950   true Lsat_1_v8_lg_4: 26467344-26471293 Lactuca sativa
Lsat_1_v5_gn_4_18960 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 26470794-26471293 Lactuca sativa
Lsat_1_v5_gn_4_18960 1.0kb upstream 1.0kb upstream 4450   true Lsat_1_v8_lg_4: 26466344-26470793 Lactuca sativa
Lsat_1_v5_gn_4_18960 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 26466344-26467343 Lactuca sativa
Lsat_1_v5_gn_4_18960 1.0kb downstream 1.0kb downstream 4450   true Lsat_1_v8_lg_4: 26467344-26471793 Lactuca sativa
Lsat_1_v5_gn_4_18960 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 26470794-26471793 Lactuca sativa
Lsat_1_v5_gn_4_18960 2.0kb upstream 2.0kb upstream 5450   true Lsat_1_v8_lg_4: 26465344-26470793 Lactuca sativa
Lsat_1_v5_gn_4_18960 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 26465344-26467343 Lactuca sativa
Lsat_1_v5_gn_4_18960 2.0kb downstream 2.0kb downstream 5450   true Lsat_1_v8_lg_4: 26467344-26472793 Lactuca sativa
Lsat_1_v5_gn_4_18960 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 26470794-26472793 Lactuca sativa
Lsat_1_v5_gn_4_18960 5.0kb upstream 5.0kb upstream 8450   true Lsat_1_v8_lg_4: 26462344-26470793 Lactuca sativa
Lsat_1_v5_gn_4_18960 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 26462344-26467343 Lactuca sativa
Lsat_1_v5_gn_4_18960 5.0kb downstream 5.0kb downstream 8450   true Lsat_1_v8_lg_4: 26467344-26475793 Lactuca sativa
Lsat_1_v5_gn_4_18960 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 26470794-26475793 Lactuca sativa
Lsat_1_v5_gn_4_18960 10.0kb upstream 10.0kb upstream 13450   true Lsat_1_v8_lg_4: 26457344-26470793 Lactuca sativa
Lsat_1_v5_gn_4_18960 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 26457344-26467343 Lactuca sativa
Lsat_1_v5_gn_4_18960 10.0kb downstream 10.0kb downstream 13450   true Lsat_1_v8_lg_4: 26467344-26480793 Lactuca sativa
Lsat_1_v5_gn_4_18960 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 26470794-26480793 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470532 5263 Asterids View MSA
123745262 5271 Pentapetalae View MSA
122786171 5272 Eudicot View MSA
122046225 5273 Angiosperm View MSA
121344721 5274 Embryophyte View MSA
123428725 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain