Gene : Lsat_1_v5_gn_4_18881 L. sativa V8
Defline:  (1 of 2) PTHR12385:SF36 - PLASMA-MEMBRANE CHOLINE TRANSPORTER-LIKE PROTEIN Genomic Order:  512
Name:  ? Lsat_1_v5_gn_4_18881 Secondary Identifier:  ? PAC:38928614
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_18881 0.5kb upstream 0.5kb upstream 2993   true Lsat_1_v8_lg_4: 26316671-26319663 Lactuca sativa
Lsat_1_v5_gn_4_18881 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 26319164-26319663 Lactuca sativa
Lsat_1_v5_gn_4_18881 0.5kb downstream 0.5kb downstream 2993   true Lsat_1_v8_lg_4: 26316171-26319163 Lactuca sativa
Lsat_1_v5_gn_4_18881 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 26316171-26316670 Lactuca sativa
Lsat_1_v5_gn_4_18881 1.0kb upstream 1.0kb upstream 3493   true Lsat_1_v8_lg_4: 26316671-26320163 Lactuca sativa
Lsat_1_v5_gn_4_18881 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 26319164-26320163 Lactuca sativa
Lsat_1_v5_gn_4_18881 1.0kb downstream 1.0kb downstream 3493   true Lsat_1_v8_lg_4: 26315671-26319163 Lactuca sativa
Lsat_1_v5_gn_4_18881 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 26315671-26316670 Lactuca sativa
Lsat_1_v5_gn_4_18881 2.0kb upstream 2.0kb upstream 4493   true Lsat_1_v8_lg_4: 26316671-26321163 Lactuca sativa
Lsat_1_v5_gn_4_18881 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 26319164-26321163 Lactuca sativa
Lsat_1_v5_gn_4_18881 2.0kb downstream 2.0kb downstream 4493   true Lsat_1_v8_lg_4: 26314671-26319163 Lactuca sativa
Lsat_1_v5_gn_4_18881 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 26314671-26316670 Lactuca sativa
Lsat_1_v5_gn_4_18881 5.0kb upstream 5.0kb upstream 7493   true Lsat_1_v8_lg_4: 26316671-26324163 Lactuca sativa
Lsat_1_v5_gn_4_18881 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 26319164-26324163 Lactuca sativa
Lsat_1_v5_gn_4_18881 5.0kb downstream 5.0kb downstream 7493   true Lsat_1_v8_lg_4: 26311671-26319163 Lactuca sativa
Lsat_1_v5_gn_4_18881 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 26311671-26316670 Lactuca sativa
Lsat_1_v5_gn_4_18881 10.0kb upstream 10.0kb upstream 12493   true Lsat_1_v8_lg_4: 26316671-26329163 Lactuca sativa
Lsat_1_v5_gn_4_18881 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 26319164-26329163 Lactuca sativa
Lsat_1_v5_gn_4_18881 10.0kb downstream 10.0kb downstream 12493   true Lsat_1_v8_lg_4: 26306671-26319163 Lactuca sativa
Lsat_1_v5_gn_4_18881 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 26306671-26316670 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466757 5263 Asterids View MSA
123736673 5271 Pentapetalae View MSA
122792379 5272 Eudicot View MSA
122042832 5273 Angiosperm View MSA
121344178 5274 Embryophyte View MSA
123428325 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain