Gene : Lsat_1_v5_gn_4_22721 L. sativa V8
Defline:  (1 of 2) PTHR31062:SF44 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 27-RELATED Genomic Order:  679
Name:  ? Lsat_1_v5_gn_4_22721 Secondary Identifier:  ? PAC:38933781
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_22721 0.5kb upstream 0.5kb upstream 3028   true Lsat_1_v8_lg_4: 36577096-36580123 Lactuca sativa
Lsat_1_v5_gn_4_22721 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 36577096-36577595 Lactuca sativa
Lsat_1_v5_gn_4_22721 0.5kb downstream 0.5kb downstream 3028   true Lsat_1_v8_lg_4: 36577596-36580623 Lactuca sativa
Lsat_1_v5_gn_4_22721 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 36580124-36580623 Lactuca sativa
Lsat_1_v5_gn_4_22721 1.0kb upstream 1.0kb upstream 3528   true Lsat_1_v8_lg_4: 36576596-36580123 Lactuca sativa
Lsat_1_v5_gn_4_22721 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 36576596-36577595 Lactuca sativa
Lsat_1_v5_gn_4_22721 1.0kb downstream 1.0kb downstream 3528   true Lsat_1_v8_lg_4: 36577596-36581123 Lactuca sativa
Lsat_1_v5_gn_4_22721 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 36580124-36581123 Lactuca sativa
Lsat_1_v5_gn_4_22721 2.0kb upstream 2.0kb upstream 4528   true Lsat_1_v8_lg_4: 36575596-36580123 Lactuca sativa
Lsat_1_v5_gn_4_22721 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 36575596-36577595 Lactuca sativa
Lsat_1_v5_gn_4_22721 2.0kb downstream 2.0kb downstream 4528   true Lsat_1_v8_lg_4: 36577596-36582123 Lactuca sativa
Lsat_1_v5_gn_4_22721 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 36580124-36582123 Lactuca sativa
Lsat_1_v5_gn_4_22721 5.0kb upstream 5.0kb upstream 7528   true Lsat_1_v8_lg_4: 36572596-36580123 Lactuca sativa
Lsat_1_v5_gn_4_22721 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 36572596-36577595 Lactuca sativa
Lsat_1_v5_gn_4_22721 5.0kb downstream 5.0kb downstream 7528   true Lsat_1_v8_lg_4: 36577596-36585123 Lactuca sativa
Lsat_1_v5_gn_4_22721 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 36580124-36585123 Lactuca sativa
Lsat_1_v5_gn_4_22721 10.0kb upstream 10.0kb upstream 12528   true Lsat_1_v8_lg_4: 36567596-36580123 Lactuca sativa
Lsat_1_v5_gn_4_22721 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 36567596-36577595 Lactuca sativa
Lsat_1_v5_gn_4_22721 10.0kb downstream 10.0kb downstream 12528   true Lsat_1_v8_lg_4: 36577596-36590123 Lactuca sativa
Lsat_1_v5_gn_4_22721 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 36580124-36590123 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479619 5263 Asterids View MSA
123745247 5271 Pentapetalae View MSA
122794660 5272 Eudicot View MSA
122049542 5273 Angiosperm View MSA
121347970 5274 Embryophyte View MSA
123380694 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain